RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CA10Q9NS85 328 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 TAS2R5Q9NYW4 299 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 USP22Q9UPT9 525 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 POFUT2Q9Y2G5 429 aa11.27□□□□□ -0.61
ACTN1-207ENST00000553290 ELOVL7A1L3X0 281 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 KPNA4O00629 521 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-207ENST00000553290 ATP8B1O43520 1251 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 RNF13O43567 381 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 CCDC22O60826 627 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 PDE5AO76074 875 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 OR5F1O95221 314 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 IGF2P01344 180 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 ASAH2BP0C7U1 165 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 UMPSP11172 480 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 IFNGR1P15260 489 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 KDELR2P33947 212 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 SERPINF1P36955 418 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 RBM34P42696 430 aaKnown RBP11.26□□□□□ -0.61
ACTN1-207ENST00000553290 CAPZA2P47755 286 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 CSNK1A1P48729 337 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 IDH3GP51553 393 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-207ENST00000553290 BIDP55957 195 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 TAS2R41P59536 307 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 PPP2R2BQ00005 443 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 SWI5Q1ZZU3 235 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 CLEC2AQ6UVW9 174 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF813Q6ZN06 617 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 DEF8Q6ZN54 512 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 SLC35D2Q76EJ3 337 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 MICU2Q8IYU8 434 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 NUP37Q8NFH4 326 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 OR10H5Q8NGA6 315 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 OR6X1Q8NH79 312 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 RCN3Q96D15 328 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 FBXO17Q96EF6 278 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 ARMCX1Q9P291 453 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 RIMS3Q9UJD0 308 aa11.26□□□□□ -0.61
ACTN1-207ENST00000553290 FBXO9Q9UK97 447 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-207ENST00000553290 FN1P02751 2386 aaKnown RBP11.25□□□□□ -0.61
ACTN1-207ENST00000553290 VSTM5A8MXK1 200 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 B9A039 149 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 ENTPD5O75356 428 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 SEC14L2O76054 403 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 MT-ND1P03886 318 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 THRBP10828 461 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 COX4I1P13073 169 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 TNFRSF1BP20333 461 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 CALCRP30988 508 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 OR1E2P47887 323 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 EFNA4P52798 201 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 SNRPD2P62316 118 aaKnown RBP11.25□□□□□ -0.61
ACTN1-207ENST00000553290 SELENOWP63302 87 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 NPRL3Q12980 569 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 MST1LQ2TV78 715 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 LRRC23Q53EV4 343 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-207ENST00000553290 CYBRD1Q53TN4 286 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 SLC46A3Q7Z3Q1 461 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 NANOGNBQ7Z5D8 188 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 MDP1Q86V88 176 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 WDFY1Q8IWB7 410 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 LRRC17Q8N6Y2 441 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 POU5F2Q8N7G0 328 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 MAPK1IP1LQ8NDC0 245 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 NANOS1Q8WY41 292 aaKnown RBP11.25□□□□□ -0.61
ACTN1-207ENST00000553290 LZICQ8WZA0 190 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 TMEM54Q969K7 222 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 SLC25A44Q96H78 314 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-207ENST00000553290 FOXB1Q99853 325 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 DENND2DQ9H6A0 471 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-207ENST00000553290 MEPEQ9NQ76 525 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-207ENST00000553290 B3GNT2Q9NY97 397 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 GLTPQ9NZD2 209 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 ARFGEF3Q5TH69 2177 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 CR1P17927 2039 aa11.25□□□□□ -0.61
ACTN1-207ENST00000553290 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 BLOC1S5-TXNDC5H3BN57 136 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 BCL10O95999 233 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 F12P00748 615 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-207ENST00000553290 TP53P04637 393 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-207ENST00000553290 CELA3BP08861 270 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 CSF3P09919 207 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 CD79AP11912 226 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 SLC25A16P16260 332 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 PCSK6P29122 969 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 IFNA8P32881 189 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 KRTAP1-1Q07627 177 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 PIN1Q13526 163 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-207ENST00000553290 EFNB3Q15768 340 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 ADIPOQQ15848 244 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 GSG1Q2KHT4 349 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 PIWIL3Q7Z3Z3 882 aaKnown RBP11.24□□□□□ -0.61
ACTN1-207ENST00000553290 MYPOPQ86VE0 399 aaPredicted RBP11.24□□□□□ -0.61
ACTN1-207ENST00000553290 NKAIN4Q8IVV8 208 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 SLC15A3Q8IY34 581 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 TMEM255BQ8WV15 326 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 TMEM239Q8WW34 195 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 FAM168AQ92567 244 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 HTRA1Q92743 480 aa11.24□□□□□ -0.61
ACTN1-207ENST00000553290 ZNF566Q969W8 418 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms