RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 DENND2DQ9H6A0 471 aaPredicted RBP13.96□□□□□ -0.17
RAB5C-209ENST00000552162 C12orf10Q9HB07 376 aa13.96□□□□□ -0.17
RAB5C-209ENST00000552162 SLC7A8Q9UHI5 535 aa13.96□□□□□ -0.17
RAB5C-209ENST00000552162 POFUT2Q9Y2G5 429 aa13.96□□□□□ -0.17
RAB5C-209ENST00000552162 IFT52Q9Y366 437 aa13.96□□□□□ -0.17
RAB5C-209ENST00000552162 TRAV36DV7A0A075B6V5 113 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 PLPP2O43688 288 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 CDC14BO60729 498 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 UBL3O95164 117 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 BCL10O95999 233 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 NQO1P15559 274 aaKnown RBP13.95□□□□□ -0.18
RAB5C-209ENST00000552162 LSP1P33241 339 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 SLC1A6P48664 564 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 MVKQ03426 396 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 RAB39AQ14964 217 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 NET1Q7Z628 596 aaPredicted RBP13.95□□□□□ -0.18
RAB5C-209ENST00000552162 SNX32Q86XE0 403 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 KIRREL3Q8IZU9 778 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB5C-209ENST00000552162 SLC35B4Q969S0 331 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 RAB39BQ96DA2 213 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 FOXB1Q99853 325 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 ULBP2Q9BZM5 246 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 ZNF696Q9H7X3 374 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 MED29Q9NX70 200 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 KLHL14Q9P2G3 628 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 HAO1Q9UJM8 370 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 FBXL3Q9UKT7 428 aa13.95□□□□□ -0.18
RAB5C-209ENST00000552162 IGKV1D-42A0A075B6H8 117 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 TMEM247A6NEH6 219 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 C17orf100A8MU93 164 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 MS4A18H0YCH9 400 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 J3QLI3 93 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 BIRC5O15392 142 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 DEAF1O75398 565 aaPredicted RBP13.94□□□□□ -0.18
RAB5C-209ENST00000552162 ANP32DO95626 131 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 UBA52P62987 128 aaKnown RBP13.94□□□□□ -0.18
RAB5C-209ENST00000552162 CCL8P80075 99 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 MS4A18Q3C1V0 323 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 DCAF12L2Q5VW00 463 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 RGS7BPQ6MZT1 257 aaPredicted RBP13.94□□□□□ -0.18
RAB5C-209ENST00000552162 SHISA2Q6UWI4 295 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 ZNF584Q8IVC4 421 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 WDFY1Q8IWB7 410 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 NANPQ8TBE9 248 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 ROPN1BQ9BZX4 212 aaPredicted RBP13.94□□□□□ -0.18
RAB5C-209ENST00000552162 ROPN1Q9HAT0 212 aaPredicted RBP13.94□□□□□ -0.18
RAB5C-209ENST00000552162 TPT1P8Q9HAU6 139 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 TAAR3PQ9P1P4 343 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 CORINQ9Y5Q5 1042 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 GPR45Q9Y5Y3 372 aa13.94□□□□□ -0.18
RAB5C-209ENST00000552162 A0A087WUJ7 227 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 A0A1B0GWA3 101 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 SDHDO14521 159 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 CLPTM1O96005 669 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 IGHV2-5P01817 119 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 HTR2AP28223 471 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 CAMK2DQ13557 499 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 MMEL1Q495T6 779 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 GTDC1Q4AE62 458 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 PDLIM3Q53GG5 364 aaPredicted RBP13.93□□□□□ -0.18
RAB5C-209ENST00000552162 ALG10BQ5I7T1 473 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 TMEM154Q6P9G4 183 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 LSMEM1Q8N8F7 131 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 GLB1L3Q8NCI6 653 aaPredicted RBP13.93□□□□□ -0.18
RAB5C-209ENST00000552162 OR6N1Q8NGY5 312 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 SNX33Q8WV41 574 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 VPS33AQ96AX1 596 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 SLC41A3Q96GZ6 507 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 TXNDC15Q96J42 360 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 TSPAN32Q96QS1 320 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 HINT3Q9NQE9 182 aaKnown RBP13.93□□□□□ -0.18
RAB5C-209ENST00000552162 PNPOQ9NVS9 261 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 THUMPD1Q9NXG2 353 aaKnown RBP13.93□□□□□ -0.18
RAB5C-209ENST00000552162 GPR160Q9UJ42 338 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 PPIAL4AQ9Y536 164 aa13.93□□□□□ -0.18
RAB5C-209ENST00000552162 PRSS23O95084 383 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 SERPINA5P05154 406 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 IL6P05231 212 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 PATE4P0C8F1 98 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 ZCCHC18P0CG32 403 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 FAM157BP0CG42 384 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 KLF3P57682 345 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-209ENST00000552162 SELENOVP59797 346 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 PUDPQ08623 228 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 ZP4Q12836 540 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 FOXL1Q12952 345 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 PCGF3Q3KNV8 242 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 SCAIQ8N9R8 606 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 RNF217Q8TC41 542 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 DNAJA4Q8WW22 397 aaPredicted RBP13.92□□□□□ -0.18
RAB5C-209ENST00000552162 C22orf15Q8WYQ4 148 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 ASPNQ9BXN1 380 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 DDX28Q9NUL7 540 aaKnown RBP13.92□□□□□ -0.18
RAB5C-209ENST00000552162 WIPI2Q9Y4P8 454 aa13.92□□□□□ -0.18
RAB5C-209ENST00000552162 IGLV3-9A0A075B6K5 115 aa13.91□□□□□ -0.18
RAB5C-209ENST00000552162 IGHV1-69-2A0A0G2JMI3 117 aa13.91□□□□□ -0.18
RAB5C-209ENST00000552162 ZNF726A6NNF4 738 aa13.91□□□□□ -0.18
RAB5C-209ENST00000552162 CLDN25C9JDP6 229 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms