RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TMED3Q9Y3Q3 217 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 TEX264Q9Y6I9 313 aa2.04□□□□□ -2.08
CPSF6-207ENST00000551516 RYR2Q92736 4967 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 NCKAP5O14513 1909 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ATP6AP2A0A1C7CYW4 349 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 DPRXA6NFQ7 191 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 TUBAL3A6NHL2 446 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 A8MUA0 341 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 MIF4GDA9UHW6 222 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SHISA9B4DS77 424 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PDLIM1O00151 329 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC33A1O00400 549 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 RTCAO00442 366 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PLPP1O14494 284 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 TFECO14948 347 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ARPC2O15144 300 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CD5LO43866 347 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FADS1O60427 444 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 TSPAN2O60636 221 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FMO6PO60774 539 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FCGR3BO75015 233 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 VPS26AO75436 327 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 BANF1O75531 89 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CRCPO75575 148 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 RAD51DO75771 328 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ATP6AP2O75787 350 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF189O75820 626 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 AQP8O94778 261 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 MBD3O95983 291 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CRYAAP02489 173 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CATP04040 527 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 C8GP07360 202 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 APRTP07741 180 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 TPM2P07951 284 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CT45A8P0DMV1 189 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CT45A9P0DMV2 189 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 C1GALT1C1LP0DN25 315 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ERVK-10P10266 1014 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 EFNA1P20827 205 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 HIST1H1TP22492 207 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 RPA3P35244 121 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 UGT2B10P36537 528 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PEX19P40855 299 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CETN2P41208 172 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CDX1P47902 265 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC6A8P48029 635 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 STARP49675 285 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CCR8P51685 355 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ARFIP1P53367 373 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SNU13P55769 128 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 MTCP1P56278 107 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 AP1S2P56377 157 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FBXW4P57775 412 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 TAS2R39P59534 338 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 STX1BP61266 288 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 BTN3A2P78410 334 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 OC90Q02509 493 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 LGALS3BPQ08380 585 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ASPHQ12797 758 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 DOC2AQ14183 400 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 RCN2Q14257 317 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PRPSAP1Q14558 356 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 OR4D1Q15615 310 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 BCL2A1Q16548 175 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 NDUFA9Q16795 377 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF674Q2M3X9 581 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 KBTBD12Q3ZCT8 623 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FILIP1LQ4L180 1135 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF585BQ52M93 769 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CT45A2Q5DJT8 189 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CDKL4Q5MAI5 379 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CCNYL2Q5T2Q4 361 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC22A10Q63ZE4 541 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF470Q6ECI4 717 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PTRHD1Q6GMV3 140 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 NPSR1Q6W5P4 371 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 HSDL2Q6YN16 418 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FOXL2NBQ6ZUU3 175 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ISCA2Q86U28 154 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 NFE4Q86UQ8 179 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC22A16Q86VW1 577 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 THOC6Q86W42 341 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 C17orf64Q86WR6 236 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 OR4N5Q8IXE1 308 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 LMNTD2Q8IXW0 634 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 GABRG1Q8N1C3 465 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ZCCHC7Q8N3Z6 543 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FADS6Q8N9I5 356 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ACOT4Q8N9L9 421 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 Q8N9P0 234 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 UXS1Q8NBZ7 420 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FAM83FQ8NEG4 500 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 TRPV3Q8NET8 790 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC24A4Q8NFF2 622 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 OR11H4Q8NGC9 324 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PSMA8Q8TAA3 256 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FBXO25Q8TCJ0 367 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 DOK4Q8TEW6 326 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 UBTD2Q8WUN7 234 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms