RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 REEP3Q6NUK4 255 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 ULK3Q6PHR2 472 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 DLEU7Q6UYE1 221 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 RBM45Q8IUH3 476 aaKnown RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF584Q8IVC4 421 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 SKA3Q8IX90 412 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 PAQR4Q8N4S7 273 aaPredicted RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 GOLGA6L1Q8N7Z2 621 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 SMYD1Q8NB12 490 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 DNAJA4Q8WW22 397 aaPredicted RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 NEU4Q8WWR8 484 aaPredicted RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 YIPF5Q969M3 257 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 MRPL24Q96A35 216 aaKnown RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 SPDL1Q96EA4 605 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 SLC47A1Q96FL8 570 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 ANKRD27Q96NW4 1050 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 DYNLRB1Q9NP97 96 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 TMEFF2Q9UIK5 374 aaPredicted RBP9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 USP22Q9UPT9 525 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 CMAHPQ9Y471 501 aa9.93□□□□□ -0.82
PRPF40B-212ENST00000551111 FAM157AC9JC47 383 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 MFN2O95140 757 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 OPN1SWP03999 348 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 AHCYP23526 432 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 PAX7P23759 505 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 PTDSS1P48651 473 aaKnown RBP9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 MRPL19P49406 292 aaKnown RBP9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 RGS8P57771 180 aaPredicted RBP9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 RAB1AP62820 205 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 PMS2P3Q13401 168 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 FXNQ16595 210 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 DUSP7Q16829 419 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 GSG1Q2KHT4 349 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 ALKBH6Q3KRA9 238 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 FAM91A1Q658Y4 838 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 LRFN4Q6PJG9 635 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 LINC00114Q6XXX2 140 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 RINLQ6ZS11 566 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF627Q7L945 461 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 NET1Q7Z628 596 aaPredicted RBP9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 PTOV1Q86YD1 416 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 LRRC17Q8N6Y2 441 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 LINC01356Q8N9X3 169 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF540Q8NDQ6 660 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 ADPRHL1Q8NDY3 354 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 GPR32P1Q8NGA4 272 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 LRR1Q96L50 414 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 TSPAN32Q96QS1 320 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 CPPED1Q9BRF8 314 aaPredicted RBP9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 CACYBPQ9HB71 228 aaKnown RBP9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 LPAR2Q9HBW0 351 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 TCF7L2Q9NQB0 619 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 MRPL39Q9NYK5 338 aaKnown RBP9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 NKIRAS1Q9NYS0 192 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 REV1Q9UBZ9 1251 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 POFUT2Q9Y2G5 429 aa9.92□□□□□ -0.82
PRPF40B-212ENST00000551111 SYNGR3O43761 229 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 VENTXO95231 258 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 CLPTM1O96005 669 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 NAT2P11245 290 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 CCL2P13500 99 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 GPX2P18283 190 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 HNF1AP20823 631 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 BIDP55957 195 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 ERVS71-1P61550 626 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 PUDPQ08623 228 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 HNRNPA0Q13151 305 aaKnown RBP9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 SQLEQ14534 574 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 AGKQ53H12 422 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 CCDC36Q8IYA8 594 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 C10orf53Q8N6V4 93 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 SCAIQ8N9R8 606 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 OR6T1Q8NGN1 323 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 OR6N1Q8NGY5 312 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 CLDND2Q8NHS1 167 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 GTF3AQ92664 365 aaKnown RBP9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 HPS1Q92902 700 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 MCHR1Q99705 422 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 FOXB1Q99853 325 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 SH3GL3Q99963 347 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 ULBP2Q9BZM5 246 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 RACGAP1Q9H0H5 632 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 RAD21L1Q9H4I0 556 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 TMEM38AQ9H6F2 299 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 TMEM27Q9HBJ8 222 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 TAS2R5Q9NYW4 299 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 TREM2Q9NZC2 230 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 TESQ9UGI8 421 aaKnown RBP9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 CORINQ9Y5Q5 1042 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 GMEB1Q9Y692 573 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 TANC2Q9HCD6 1990 aa9.91□□□□□ -0.82
PRPF40B-212ENST00000551111 ZNF726A6NNF4 738 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 M0R233 179 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 HAX1O00165 279 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 RGS9O75916 674 aaPredicted RBP9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 ADORA3P0DMS8 318 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 SLC6A2P23975 617 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 GLRXP35754 106 aa9.9□□□□□ -0.82
PRPF40B-212ENST00000551111 SRP14P37108 136 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms