RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CDK20Q8IZL9 346 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 SVOPLQ8N434 492 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 PIK3C3Q8NEB9 887 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 PFN4Q8NHR9 129 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 FOXN4Q96NZ1 517 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 TNFRSF13CQ96RJ3 184 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 SELENONQ9NZV5 590 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 FZR1Q9UM11 496 aa13.77□□□□□ -0.21
COX6A1-203ENST00000550009 IGHV4-61A0A0C4DH41 118 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 OR6C65A6NJZ3 312 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 VWC2LB2RUY7 222 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 LYNX1G3V0Z9 82 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 PIP5K1CO60331 668 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 TP53P04637 393 aaPredicted RBP13.76□□□□□ -0.21
COX6A1-203ENST00000550009 LYNX1P0DP58 116 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 OR1E2P47887 323 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 UGT2B15P54855 530 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 SH3BGRP55822 239 aaPredicted RBP13.76□□□□□ -0.21
COX6A1-203ENST00000550009 CARTPTQ16568 116 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 VMACQ2NL98 169 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
COX6A1-203ENST00000550009 C5orf46Q6UWT4 87 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF813Q6ZN06 617 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 IL17RELQ6ZVW7 336 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 LRP11Q86VZ4 500 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 SCAIQ8N9R8 606 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 OR5J2Q8NH18 312 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 OR6S1Q8NH40 331 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 LRRC58Q96CX6 371 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 KCNS3Q9BQ31 491 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 SAR1AQ9NR31 198 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 C20orf141Q9NUB4 165 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 TRIM33Q9UPN9 1127 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 CORINQ9Y5Q5 1042 aa13.76□□□□□ -0.21
COX6A1-203ENST00000550009 LOC100653049A0A140TA62 436 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 hCG_2039718K7EN88 272 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 FMO6PO60774 539 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 KRT34O76011 436 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF14P17017 642 aaPredicted RBP13.75□□□□□ -0.21
COX6A1-203ENST00000550009 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 SRSF2Q01130 221 aaKnown RBP13.75□□□□□ -0.21
COX6A1-203ENST00000550009 GUCY1A3Q02108 690 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 CHRNB3Q05901 458 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
COX6A1-203ENST00000550009 GGTLC2Q14390 218 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 PXKQ7Z7A4 578 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 CARM1Q86X55 608 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF584Q8IVC4 421 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 SKA3Q8IX90 412 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 POU5F2Q8N7G0 328 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 TMEM255BQ8WV15 326 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 TMEM54Q969K7 222 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF583Q96ND8 569 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 EPYCQ99645 322 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 DOK1Q99704 481 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF426Q9BUY5 554 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 ULBP2Q9BZM5 246 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 PLK3Q9H4B4 646 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 ARMCX1Q9P291 453 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 MYEF2Q9P2K5 600 aaKnown RBP13.75□□□□□ -0.21
COX6A1-203ENST00000550009 SH3GLB1Q9Y371 365 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 PMF1-BGLAPU3KQ54 211 aa13.75□□□□□ -0.21
COX6A1-203ENST00000550009 TRAPPC13A5PLN9 417 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 MRASO14807 208 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 C8BP07358 591 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 IL2RGP31785 369 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 PTDSS1P48651 473 aaKnown RBP13.74□□□□□ -0.21
COX6A1-203ENST00000550009 SNRPD2P62316 118 aaKnown RBP13.74□□□□□ -0.21
COX6A1-203ENST00000550009 SNTB2Q13425 540 aaKnown RBP13.74□□□□□ -0.21
COX6A1-203ENST00000550009 PIN1Q13526 163 aaPredicted RBP13.74□□□□□ -0.21
COX6A1-203ENST00000550009 RAB39AQ14964 217 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 C3orf36Q3SXR2 165 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 TTC33Q6PID6 262 aaPredicted RBP13.74□□□□□ -0.21
COX6A1-203ENST00000550009 DEF8Q6ZN54 512 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 SLC35D2Q76EJ3 337 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 CCDC80Q76M96 950 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 SPATA21Q7Z572 469 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 HIPK1Q86Z02 1210 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 PAQR4Q8N4S7 273 aaPredicted RBP13.74□□□□□ -0.21
COX6A1-203ENST00000550009 NUP37Q8NFH4 326 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 BHLHE22Q8NFJ8 381 aaPredicted RBP13.74□□□□□ -0.21
COX6A1-203ENST00000550009 OR6N1Q8NGY5 312 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 SLC26A7Q8TE54 656 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 TSPEARQ8WU66 669 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 FOXB1Q99853 325 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 SH3GL3Q99963 347 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 TPK1Q9H3S4 243 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 POFUT2Q9Y2G5 429 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 NOX1Q9Y5S8 564 aa13.74□□□□□ -0.21
COX6A1-203ENST00000550009 ARHGAP32A7KAX9 2087 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 LRP5LA4QPB2 252 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF726A6NNF4 738 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
COX6A1-203ENST00000550009 TLX2O43763 284 aaPredicted RBP13.73□□□□□ -0.21
COX6A1-203ENST00000550009 F13BP05160 661 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 ASAH2BP0C7U1 165 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 CCL2P13500 99 aa13.73□□□□□ -0.21
COX6A1-203ENST00000550009 ZNF35P13682 527 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms