RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 HTR2AP28223 471 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 MRPL19P49406 292 aaKnown RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 RPS23P62266 143 aaKnown RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 MRPS11P82912 194 aaKnown RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 IL1RL1Q01638 556 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 SCGB2A2Q13296 93 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 TRIP10Q15642 601 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 TRMT5Q32P41 509 aaKnown RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 MS4A18Q3C1V0 323 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 SWT1Q5T5J6 900 aaKnown RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 KRT80Q6KB66 452 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 REEP3Q6NUK4 255 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 NHLRC1Q6VVB1 395 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF813Q6ZN06 617 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 BHLHE22Q8NFJ8 381 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 OR9I1Q8NGQ6 314 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 ASPNQ9BXN1 380 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 RSPO3Q9BXY4 272 aaPredicted RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 MRPL37Q9BZE1 423 aaKnown RBP11.07□□□□□ -0.64
PTCH1-218ENST00000548945 EVA1AQ9H8M9 152 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 SELENONQ9NZV5 590 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 REV1Q9UBZ9 1251 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 GMEB1Q9Y692 573 aa11.07□□□□□ -0.64
PTCH1-218ENST00000548945 PRORSD1PA6NEY8 169 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 SEC14L2O76054 403 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 HPRP00739 348 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 TFP02787 698 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 CD79AP11912 226 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 NQO1P15559 274 aaKnown RBP11.06□□□□□ -0.64
PTCH1-218ENST00000548945 ITGA2P17301 1181 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 ACHEP22303 614 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 PPIBP23284 216 aaKnown RBP11.06□□□□□ -0.64
PTCH1-218ENST00000548945 SEC24CP53992 1094 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 TMEM33P57088 247 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 PUDPQ08623 228 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 FXNQ16595 210 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 ELFN2Q5R3F8 820 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 LRIF1Q5T3J3 769 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 MAVSQ7Z434 540 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 PXKQ7Z7A4 578 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 OR52B2Q96RD2 323 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 TMEM43Q9BTV4 400 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 RACGAP1Q9H0H5 632 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 TPK1Q9H3S4 243 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 MRPL39Q9NYK5 338 aaKnown RBP11.06□□□□□ -0.64
PTCH1-218ENST00000548945 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 POFUT2Q9Y2G5 429 aa11.06□□□□□ -0.64
PTCH1-218ENST00000548945 A0A0B4J2E0 115 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 A0A1B0GX12 115 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF726A6NNF4 738 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 LYNX1G3V0Z9 82 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 ENTPD5O75356 428 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 UBL3O95164 117 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 RAB36O95755 333 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 FAM107AO95990 144 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 BGLAPP02818 100 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 LYNX1P0DP58 116 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 HLA-DOBP13765 273 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
PTCH1-218ENST00000548945 NCALDP61601 193 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 CDK6Q00534 326 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 GALK2Q01415 458 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 PMS2P3Q13401 168 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 CCNIQ14094 377 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 MSMPQ1L6U9 139 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 GCNT6Q5T4J0 391 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 CARD17Q5XLA6 110 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 SLC2A7Q6PXP3 512 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 CPLX4Q7Z7G2 160 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 COMTD1Q86VU5 262 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 NFKBIDQ8NI38 313 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 RDH5Q92781 318 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF607Q96SK3 696 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 FOXB1Q99853 325 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 EMC6Q9BV81 110 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 ULBP2Q9BZM5 246 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF385DQ9H6B1 395 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 TMEM38AQ9H6F2 299 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 TMEM27Q9HBJ8 222 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 SLC25A37Q9NYZ2 338 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF224Q9NZL3 707 aa11.05□□□□□ -0.64
PTCH1-218ENST00000548945 ZNF346Q9UL40 294 aaKnown RBP11.05□□□□□ -0.64
PTCH1-218ENST00000548945 MEGF8Q7Z7M0 2845 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 PLPP3O14495 311 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
PTCH1-218ENST00000548945 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 SAGP10523 405 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-218ENST00000548945 B4GALT1P15291 398 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 DRD4P21917 467 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 CBLP22681 906 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 PTDSS1P48651 473 aaKnown RBP11.04□□□□□ -0.64
PTCH1-218ENST00000548945 RGS8P57771 180 aaPredicted RBP11.04□□□□□ -0.64
PTCH1-218ENST00000548945 RAB1AP62820 205 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 PIGFQ07326 219 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 OR1Q1Q15612 314 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 MMEL1Q495T6 779 aa11.04□□□□□ -0.64
PTCH1-218ENST00000548945 GKAP1Q5VSY0 366 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms