RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 LINC01356Q8N9X3 169 aa17.56■□□□□ 0.4
SSH1-207ENST00000547862 MRPL24Q96A35 216 aaKnown RBP17.56■□□□□ 0.4
SSH1-207ENST00000547862 C1orf159Q96HA4 380 aa17.56■□□□□ 0.4
SSH1-207ENST00000547862 EBF4Q9BQW3 602 aa17.56■□□□□ 0.4
SSH1-207ENST00000547862 WFDC6Q9BQY6 131 aa17.56■□□□□ 0.4
SSH1-207ENST00000547862 A0A0B4J2E0 115 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 A0A1B0GX12 115 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 ZNF726A6NNF4 738 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 M0R3H8 397 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 NR4A1P22736 598 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 THBS2P35442 1172 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 GIPRP48546 466 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 GALK2Q01415 458 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 LRIF1Q5T3J3 769 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 FAM91A1Q658Y4 838 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 RANBP3LQ86VV4 465 aaPredicted RBP17.55■□□□□ 0.4
SSH1-207ENST00000547862 ARMC8Q8IUR7 673 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 FUNDC1Q8IVP5 155 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 CCDC36Q8IYA8 594 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 SMYD1Q8NB12 490 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 IL17RDQ8NFM7 739 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 TLCD1Q96CP7 247 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 FOXB1Q99853 325 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 TMBIM4Q9HC24 238 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 B3GNT2Q9NY97 397 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 TMEFF2Q9UIK5 374 aaPredicted RBP17.55■□□□□ 0.4
SSH1-207ENST00000547862 CORINQ9Y5Q5 1042 aa17.55■□□□□ 0.4
SSH1-207ENST00000547862 OPN1SWP03999 348 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 C8BP07358 591 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 ZNF14P17017 642 aaPredicted RBP17.54■□□□□ 0.4
SSH1-207ENST00000547862 PPIBP23284 216 aaKnown RBP17.54■□□□□ 0.4
SSH1-207ENST00000547862 SLC6A2P23975 617 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 CSNK1A1P48729 337 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 SLC18A1P54219 525 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 CDH12P55289 794 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 CDH15P55291 814 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 ALKBH6Q3KRA9 238 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 AGKQ53H12 422 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 LIPNQ5VXI9 398 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 BLOC1S3Q6QNY0 202 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 SCAIQ8N9R8 606 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 ZNF607Q96SK3 696 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 LPAR2Q9HBW0 351 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 SLCO1B3Q9NPD5 702 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 MYEF2Q9P2K5 600 aaKnown RBP17.54■□□□□ 0.4
SSH1-207ENST00000547862 REV1Q9UBZ9 1251 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 ANGPT4Q9Y264 503 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 SPEF1Q9Y4P9 236 aa17.54■□□□□ 0.4
SSH1-207ENST00000547862 A0A1W2PPW3 197 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 PRORSD1PA6NEY8 169 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 TCF21O43680 179 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 SYNGR3O43761 229 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 PATE4P0C8F1 98 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 ADORA3P0DMS8 318 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 ITGA2P17301 1181 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 IDH3AP50213 366 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 SEC24CP53992 1094 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 BIDP55957 195 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 RIN1Q13671 783 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 MELKQ14680 651 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 RAB39AQ14964 217 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 LRP11Q86VZ4 500 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 HPS1Q92902 700 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 SLC41A3Q96GZ6 507 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 OR51B6Q9H340 312 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 MRPL39Q9NYK5 338 aaKnown RBP17.53■□□□□ 0.4
SSH1-207ENST00000547862 ZNF224Q9NZL3 707 aa17.53■□□□□ 0.4
SSH1-207ENST00000547862 LOC102725191A0A1B0GVB3 256 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 CPSF4LA6NMK7 179 aaKnown RBP17.52■□□□□ 0.4
SSH1-207ENST00000547862 EVPLLA8MZ36 301 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 KPNA4O00629 521 aaPredicted RBP17.52■□□□□ 0.4
SSH1-207ENST00000547862 TPST2O60704 377 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 GPR6P46095 362 aaPredicted RBP17.52■□□□□ 0.4
SSH1-207ENST00000547862 RAB1AP62820 205 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 CARM1Q86X55 608 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 SNX32Q86XE0 403 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 HIPK4Q8NE63 616 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 OR6S1Q8NH40 331 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 VANGL1Q8TAA9 524 aaPredicted RBP17.52■□□□□ 0.4
SSH1-207ENST00000547862 LRRC8CQ8TDW0 803 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 MCHR1Q99705 422 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 CPPED1Q9BRF8 314 aaPredicted RBP17.52■□□□□ 0.4
SSH1-207ENST00000547862 CORO2BQ9UQ03 480 aa17.52■□□□□ 0.4
SSH1-207ENST00000547862 TRBV5-3A0A0A0MS03 114 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 PLPP3O14495 311 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 SERPINB7O75635 380 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 UBL3O95164 117 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 OR6A2O95222 327 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 HPXP02790 462 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 LSP1P33241 339 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 RPS23P62266 143 aaKnown RBP17.51■□□□□ 0.39
SSH1-207ENST00000547862 CYP51A1Q16850 503 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 ELFN2Q5R3F8 820 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 RFLNBQ8N5W9 214 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 OR5J2Q8NH18 312 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 LRR1Q96L50 414 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 C7orf26Q96N11 449 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 TMEM43Q9BTV4 400 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 TMEM38AQ9H6F2 299 aa17.51■□□□□ 0.39
SSH1-207ENST00000547862 DUSP13Q9UII6 198 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms