RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 ZNF19P17023 458 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 CELP19835 753 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 SDHBP21912 280 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 NR4A1P22736 598 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 S100A5P33763 92 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 CRYBB2P43320 205 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 NOVA1P51513 510 aaKnown RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 NCS1P62166 190 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 GLO1Q04760 184 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 AQP6Q13520 282 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 DCTN2Q13561 401 aaKnown RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 TOMM20Q15388 145 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF829Q3KNS6 432 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 TMEM176BQ3YBM2 270 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF404Q494X3 552 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 GXYLT1Q4G148 440 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 CRTC2Q53ET0 693 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 MESTQ5EB52 335 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 AGAP7PQ5VUJ5 663 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 RAET1LQ5VY80 246 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 RPL22L1Q6P5R6 122 aaKnown RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 CD200R1LQ6Q8B3 271 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 PAQR6Q6TCH4 344 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 SLC35D2Q76EJ3 337 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 VASH1Q7L8A9 365 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 FAM220AQ7Z4H9 259 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 TMEM99Q8N816 258 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 EXD3Q8N9H8 876 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 NDNFQ8TB73 568 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 ARL5BQ96KC2 179 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 AGAP4Q96P64 663 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 GNRHR2Q96P88 292 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 INTS14Q96SY0 518 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 ZNF649Q9BS31 505 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 WDR12Q9GZL7 423 aaKnown RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 MARCH7Q9H992 704 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 PROK2Q9HC23 129 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 ZFP64Q9NPA5 681 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 B9D1Q9UPM9 204 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 POLHQ9Y253 713 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 KLF13Q9Y2Y9 288 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-215ENST00000547672 DNAH14Q0VDD8 3507 aa12.09□□□□□ -0.47
PTCH1-215ENST00000547672 PNMA8CA0A1B0GUJ8 204 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF726A6NNF4 738 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 C17orf51A8MQB3 221 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 KLRC4-KLRK1H3BQV0 150 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 TM4SF5O14894 197 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 GPRIN2O60269 458 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 ZIC3O60481 467 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 KHDRBS3O75525 346 aaKnown RBP12.08□□□□□ -0.48
PTCH1-215ENST00000547672 GYPBP06028 91 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 ADRA2AP08913 450 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 MRPL3P09001 348 aaKnown RBP12.08□□□□□ -0.48
PTCH1-215ENST00000547672 CLUP10909 449 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 IMPDH2P12268 514 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF43P17038 809 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 CD96P40200 585 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 EGR3Q06889 387 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF846Q147U1 533 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 CDONQ4KMG0 1287 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 THEM4Q5T1C6 240 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 TUBA3EQ6PEY2 450 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 KCTD18Q6PI47 426 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-215ENST00000547672 KLBQ86Z14 1044 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 OR14L1PQ8NHC6 308 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 TBC1D15Q8TC07 691 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 AP3S1Q92572 193 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 THRSPQ92748 146 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 RPL3LQ92901 407 aaKnown RBP12.08□□□□□ -0.48
PTCH1-215ENST00000547672 BORCS5Q969J3 196 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 INTS12Q96CB8 462 aaKnown RBP12.08□□□□□ -0.48
PTCH1-215ENST00000547672 RNF32Q9H0A6 362 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 WDR76Q9H967 626 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 PALMDQ9NP74 551 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 FAM86C1Q9NVL1 165 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 KLHL9Q9P2J3 617 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 LAMP5Q9UJQ1 280 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 PEX16Q9Y5Y5 336 aa12.08□□□□□ -0.48
PTCH1-215ENST00000547672 MPDZO75970 2070 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 SLC22A23A1A5C7 686 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 OR2M5A3KFT3 312 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 OGG1O15527 345 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 EFNA2O43921 213 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 GPX5O75715 221 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 AKR7A3O95154 331 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 HLA-DQA2P01906 255 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 KRT8P05787 483 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 CD46P15529 392 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF823P16415 610 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 GUCA1AP43080 201 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-215ENST00000547672 TGM4P49221 684 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 SIRPAP78324 504 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 ZNF85Q03923 595 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 RTP5Q14D33 572 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 LINC01590Q5TEZ4 76 aa12.07□□□□□ -0.48
PTCH1-215ENST00000547672 B3GNTL1Q67FW5 361 aaPredicted RBP12.07□□□□□ -0.48
PTCH1-215ENST00000547672 ASB18Q6ZVZ8 466 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms