RNA–Protein interactions for RNA: ENST00000547394.6

CUX1-212, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-212ENST00000547394 HDHD2Q9H0R4 259 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 CPNE5Q9HCH3 593 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 BRD7Q9NPI1 651 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 RPH3AQ9Y2J0 694 aaPredicted RBP10.01□□□□□ -0.81
CUX1-212ENST00000547394 NUP210LQ5VU65 1888 aa10.01□□□□□ -0.81
CUX1-212ENST00000547394 HTR3EA5X5Y0 456 aa10□□□□□ -0.81
CUX1-212ENST00000547394 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
CUX1-212ENST00000547394 F10P00742 488 aa10□□□□□ -0.81
CUX1-212ENST00000547394 PPP3R1P63098 170 aa10□□□□□ -0.81
CUX1-212ENST00000547394 ZXDAP98168 799 aa10□□□□□ -0.81
CUX1-212ENST00000547394 SCN1BQ07699 218 aa10□□□□□ -0.81
CUX1-212ENST00000547394 CDC20Q12834 499 aa10□□□□□ -0.81
CUX1-212ENST00000547394 LCN1P1Q5VSP4 162 aa10□□□□□ -0.81
CUX1-212ENST00000547394 ZNF57Q68EA5 555 aaPredicted RBP10□□□□□ -0.81
CUX1-212ENST00000547394 CPEB2Q7Z5Q1 589 aaKnown RBP10□□□□□ -0.81
CUX1-212ENST00000547394 BMPERQ8N8U9 685 aa10□□□□□ -0.81
CUX1-212ENST00000547394 EXD3Q8N9H8 876 aa10□□□□□ -0.81
CUX1-212ENST00000547394 POMGNT2Q8NAT1 580 aa10□□□□□ -0.81
CUX1-212ENST00000547394 TXNDC15Q96J42 360 aa10□□□□□ -0.81
CUX1-212ENST00000547394 PPP1R3EQ9H7J1 279 aa10□□□□□ -0.81
CUX1-212ENST00000547394 INPP5EQ9NRR6 644 aa10□□□□□ -0.81
CUX1-212ENST00000547394 LAMP5Q9UJQ1 280 aa10□□□□□ -0.81
CUX1-212ENST00000547394 FBXL2Q9UKC9 423 aa10□□□□□ -0.81
CUX1-212ENST00000547394 XKRYO14609 159 aa10□□□□□ -0.81
CUX1-212ENST00000547394 TO15178 435 aa10□□□□□ -0.81
CUX1-212ENST00000547394 EFNA2O43921 213 aa10□□□□□ -0.81
CUX1-212ENST00000547394 OR6A2O95222 327 aa10□□□□□ -0.81
CUX1-212ENST00000547394 FCER2P06734 321 aa10□□□□□ -0.81
CUX1-212ENST00000547394 SPARCP09486 303 aa10□□□□□ -0.81
CUX1-212ENST00000547394 FBXO45P0C2W1 286 aa10□□□□□ -0.81
CUX1-212ENST00000547394 RAB3BP20337 219 aa10□□□□□ -0.81
CUX1-212ENST00000547394 KIR2DL3P43628 341 aa10□□□□□ -0.81
CUX1-212ENST00000547394 MTNR1BP49286 362 aa10□□□□□ -0.81
CUX1-212ENST00000547394 POU4F2Q12837 409 aa10□□□□□ -0.81
CUX1-212ENST00000547394 ZSWIM7Q19AV6 140 aa10□□□□□ -0.81
CUX1-212ENST00000547394 TRIQKQ629K1 86 aa10□□□□□ -0.81
CUX1-212ENST00000547394 ZNF385CQ66K41 422 aaPredicted RBP10□□□□□ -0.81
CUX1-212ENST00000547394 TMEM53Q6P2H8 277 aa10□□□□□ -0.81
CUX1-212ENST00000547394 PRSS45Q7RTY3 260 aa10□□□□□ -0.81
CUX1-212ENST00000547394 TIGD4Q8IY51 512 aa10□□□□□ -0.81
CUX1-212ENST00000547394 MINDY2Q8NBR6 621 aa10□□□□□ -0.81
CUX1-212ENST00000547394 UBASH3BQ8TF42 649 aa10□□□□□ -0.81
CUX1-212ENST00000547394 ITPKCQ96DU7 683 aa10□□□□□ -0.81
CUX1-212ENST00000547394 SLCO1C1Q9NYB5 712 aa10□□□□□ -0.81
CUX1-212ENST00000547394 NLKQ9UBE8 527 aa10□□□□□ -0.81
CUX1-212ENST00000547394 TRAPPC4Q9Y296 219 aa10□□□□□ -0.81
CUX1-212ENST00000547394 PHF3Q92576 2039 aaKnown RBP10□□□□□ -0.81
CUX1-212ENST00000547394 IGKV1D-43A0A0B4J1Z2 117 aa10□□□□□ -0.81
CUX1-212ENST00000547394 A0A1W2PNR3 127 aa10□□□□□ -0.81
CUX1-212ENST00000547394 OR6C70A6NIJ9 312 aa10□□□□□ -0.81
CUX1-212ENST00000547394 EEF1E1O43324 174 aaKnown RBP10□□□□□ -0.81
CUX1-212ENST00000547394 SFTPDP35247 375 aa10□□□□□ -0.81
CUX1-212ENST00000547394 CASP3P42574 277 aa10□□□□□ -0.81
CUX1-212ENST00000547394 SLC6A8P48029 635 aa10□□□□□ -0.81
CUX1-212ENST00000547394 POLR2HP52434 150 aaKnown RBP10□□□□□ -0.81
CUX1-212ENST00000547394 INSM1Q01101 510 aaPredicted RBP10□□□□□ -0.81
CUX1-212ENST00000547394 BDH1Q02338 343 aa10□□□□□ -0.81
CUX1-212ENST00000547394 GGTLC2Q14390 218 aa10□□□□□ -0.81
CUX1-212ENST00000547394 HBMQ6B0K9 141 aa10□□□□□ -0.81
CUX1-212ENST00000547394 CORO6Q6QEF8 472 aa10□□□□□ -0.81
CUX1-212ENST00000547394 ZNF517Q6ZMY9 492 aaPredicted RBP10□□□□□ -0.81
CUX1-212ENST00000547394 LINC00346Q8IVM7 164 aa10□□□□□ -0.81
CUX1-212ENST00000547394 CARFQ8N187 725 aa10□□□□□ -0.81
CUX1-212ENST00000547394 TMEM105Q8N8V8 129 aa10□□□□□ -0.81
CUX1-212ENST00000547394 ABHD1Q96SE0 405 aa10□□□□□ -0.81
CUX1-212ENST00000547394 GPX7Q96SL4 187 aaPredicted RBP10□□□□□ -0.81
CUX1-212ENST00000547394 METTL7AQ9H8H3 244 aa10□□□□□ -0.81
CUX1-212ENST00000547394 MRPL15Q9P015 296 aaKnown RBP10□□□□□ -0.81
CUX1-212ENST00000547394 FRRS1LQ9P0K9 344 aa10□□□□□ -0.81
CUX1-212ENST00000547394 PTRH2Q9Y3E5 179 aaKnown RBP10□□□□□ -0.81
CUX1-212ENST00000547394 NOX1Q9Y5S8 564 aa10□□□□□ -0.81
CUX1-212ENST00000547394 A0A0B4J293 547 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 D6RAR5 112 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 H0YC42 278 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 SC5DO75845 299 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 EIF1AXP47813 144 aaKnown RBP9.99□□□□□ -0.81
CUX1-212ENST00000547394 SLC26A5P58743 744 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 ACTA2P62736 377 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 ACTG2P63267 376 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 CEP78Q5JTW2 689 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 FAM69AQ5T7M9 428 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 PAMR1Q6UXH9 720 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 KRT74Q7RTS7 529 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 MAMDC2Q7Z304 686 aaPredicted RBP9.99□□□□□ -0.81
CUX1-212ENST00000547394 PXKQ7Z7A4 578 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 AKAP14Q86UN6 197 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 NSMAFQ92636 917 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 UBL7Q96S82 380 aaPredicted RBP9.99□□□□□ -0.81
CUX1-212ENST00000547394 GFI1Q99684 422 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 SEMA4CQ9C0C4 833 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 TGIF2Q9GZN2 237 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 KCNK15Q9H427 330 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 SLC22A13Q9Y226 551 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 SPTBN2O15020 2390 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 IGLV3-12A0A075B6K2 115 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 ZNF593O00488 134 aaPredicted RBP9.99□□□□□ -0.81
CUX1-212ENST00000547394 EIF1AYO14602 144 aaKnown RBP9.99□□□□□ -0.81
CUX1-212ENST00000547394 EIF4E2O60573 245 aaKnown RBP9.99□□□□□ -0.81
CUX1-212ENST00000547394 AHSA1O95433 338 aa9.99□□□□□ -0.81
CUX1-212ENST00000547394 CD3GP09693 182 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms