RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DNAJA1P31689 397 aaKnown RBP12.73□□□□□ -0.37
DDX54-203ENST00000546869 SH3BGRP55822 239 aaPredicted RBP12.73□□□□□ -0.37
DDX54-203ENST00000546869 BIDP55957 195 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 ACKR1Q16570 336 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 HIST3H3Q16695 136 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 ARMC4Q5T2S8 1044 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 ZNF627Q7L945 461 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 GPR137CQ8N3F9 429 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 OR51A7Q8NH64 312 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 MOSPD2Q8NHP6 518 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 MAGEE2Q8TD90 523 aaPredicted RBP12.73□□□□□ -0.37
DDX54-203ENST00000546869 TMEM54Q969K7 222 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 UTP4Q969X6 686 aaKnown RBP12.73□□□□□ -0.37
DDX54-203ENST00000546869 FAM46AQ96IP4 442 aaKnown RBP12.73□□□□□ -0.37
DDX54-203ENST00000546869 GPX7Q96SL4 187 aaPredicted RBP12.73□□□□□ -0.37
DDX54-203ENST00000546869 EMC6Q9BV81 110 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 MRPL13Q9BYD1 178 aaKnown RBP12.73□□□□□ -0.37
DDX54-203ENST00000546869 NDEL1Q9GZM8 345 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 REEP1Q9H902 201 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 B3GAT2Q9NPZ5 323 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 AURKCQ9UQB9 309 aa12.73□□□□□ -0.37
DDX54-203ENST00000546869 FREM1Q5H8C1 2179 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 CIB4A0PJX0 185 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 UNC119BA6NIH7 251 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 OR10H3O60404 316 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 FKBP6O75344 327 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 CTAG2O75638 210 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 CST1P01037 141 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 F13BP05160 661 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 GPR4P46093 362 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 GSSP48637 474 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 FOXG1P55316 489 aaPredicted RBP12.72□□□□□ -0.37
DDX54-203ENST00000546869 TLE4Q04727 773 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 TSPAN31Q12999 210 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 TAB1Q15750 504 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 MICAQ29983 383 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 C1orf146Q5VVC0 180 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 FAM205BPQ63HN1 556 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 ANKRD34AQ69YU3 496 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 ZNF770Q6IQ21 691 aaPredicted RBP12.72□□□□□ -0.37
DDX54-203ENST00000546869 HMBOX1Q6NT76 420 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 LINGO2Q7L985 606 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 OR13C2Q8NGS9 318 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 GNPDA2Q8TDQ7 276 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 ZNF566Q969W8 418 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 SLCO4A1Q96BD0 722 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 GPA33Q99795 319 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 NGBQ9NPG2 151 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 OBP2BQ9NPH6 170 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 RASSF1Q9NS23 344 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 ARMC1Q9NVT9 282 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 GLTPQ9NZD2 209 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 PKDREJQ9NTG1 2253 aa12.72□□□□□ -0.37
DDX54-203ENST00000546869 TRAV27A0A087WT01 109 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 ARRDC5A6NEK1 342 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 AHCYL1O43865 530 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 SERPINI2O75830 405 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 CIB2O75838 187 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 CCNB2O95067 398 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 NDUFB2O95178 105 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 IGHG1P01857 330 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 CD14P08571 375 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 PGA4P0DJD7 388 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 PGA3P0DJD8 388 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 NR2C1P13056 603 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 PRF1P14222 555 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 CSNK1A1P48729 337 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 ZNF133P52736 654 aaPredicted RBP12.71□□□□□ -0.37
DDX54-203ENST00000546869 CTXN1P60606 82 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 RPL27P61353 136 aaKnown RBP12.71□□□□□ -0.37
DDX54-203ENST00000546869 ROR2Q01974 943 aaKnown RBP12.71□□□□□ -0.37
DDX54-203ENST00000546869 CAMK2DQ13557 499 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 TSC22D1Q15714 1073 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 PGBD2Q6P3X8 592 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 ANKRD16Q6P6B7 361 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 OR1K1Q8NGR3 316 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 OR6N1Q8NGY5 312 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 FNDC8Q8TC99 324 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 ASB10Q8WXI3 467 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 MUCL1Q96DR8 90 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 RSRC1Q96IZ7 334 aaKnown RBP12.71□□□□□ -0.37
DDX54-203ENST00000546869 DGCR6LQ9BY27 220 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 CRLF2Q9HC73 371 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 NRIP3Q9NQ35 241 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 DNAJB9Q9UBS3 223 aa12.71□□□□□ -0.37
DDX54-203ENST00000546869 ZNF346Q9UL40 294 aaKnown RBP12.71□□□□□ -0.37
DDX54-203ENST00000546869 SAMHD1Q9Y3Z3 626 aaKnown RBP12.71□□□□□ -0.37
DDX54-203ENST00000546869 A6NIZ1 184 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 DEFB108AA8MXU0 73 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 ZNF99A8MXY4 864 aaPredicted RBP12.7□□□□□ -0.38
DDX54-203ENST00000546869 MCIDASD6RGH6 385 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 MGRN1O60291 552 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 RAD51DO75771 328 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 HRGP04196 525 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 APEHP13798 732 aaKnown RBP12.7□□□□□ -0.38
DDX54-203ENST00000546869 ACADSP16219 412 aa12.7□□□□□ -0.38
DDX54-203ENST00000546869 ZNF26P17031 533 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms