RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 MED29Q9NX70 200 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 SPEF1Q9Y4P9 236 aa8.13□□□□□ -1.11
YBX3-218ENST00000546298 AKAP9Q99996 3911 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 IGHV2OR16-5A0A0B4J2B6 119 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 LOC390937A0A1W2PQ73 354 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 BBIP1A8MTZ0 92 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 GPRIN2O60269 458 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 SERPINI2O75830 405 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 RAB36O95755 333 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 CH25HO95992 272 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 UMPSP11172 480 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 CD79AP11912 226 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 IFNGR1P15260 489 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 CALCRP30988 508 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 THBS4P35443 961 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 GZMKP49863 264 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 ARFIP2P53365 341 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 BIDP55957 195 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 LSM11P83369 360 aaKnown RBP eCLIP8.12□□□□□ -1.11
YBX3-218ENST00000546298 HGFACQ04756 655 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 ZP4Q12836 540 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 CAMK2DQ13557 499 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 DAG1Q14118 895 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 NPTX1Q15818 432 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 CARTPTQ16568 116 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 ZNF74Q16587 644 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 PODNL1Q6PEZ8 512 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 NHLRC1Q6VVB1 395 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 SLC35D2Q76EJ3 337 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 CCDC80Q76M96 950 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 ZNF627Q7L945 461 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 PIWIL3Q7Z3Z3 882 aaKnown RBP8.12□□□□□ -1.11
YBX3-218ENST00000546298 SPATA21Q7Z572 469 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 DPPA2Q7Z7J5 298 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 PCYOX1LQ8NBM8 494 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 OR6X1Q8NH79 312 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 VANGL1Q8TAA9 524 aaPredicted RBP8.12□□□□□ -1.11
YBX3-218ENST00000546298 ADAMTS16Q8TE57 1224 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 NEU4Q8WWR8 484 aaPredicted RBP8.12□□□□□ -1.11
YBX3-218ENST00000546298 TAMM41Q96BW9 452 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 LRRC58Q96CX6 371 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 ZNF837Q96EG3 531 aaPredicted RBP8.12□□□□□ -1.11
YBX3-218ENST00000546298 SORCS2Q96PQ0 1159 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 KCNK17Q96T54 332 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 FOXB1Q99853 325 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 TMEM120AQ9BXJ8 343 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 PCDHAC1Q9H158 963 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 DYNLRB1Q9NP97 96 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 TMEM160Q9NX00 188 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 B3GNT2Q9NY97 397 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 ZNF229Q9UJW7 825 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 SLC7A7Q9UM01 511 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 JMJD1CQ15652 2540 aa8.12□□□□□ -1.11
YBX3-218ENST00000546298 HRNRQ86YZ3 2850 aaPredicted RBP8.12□□□□□ -1.11
YBX3-218ENST00000546298 ALPK2Q86TB3 2170 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 A0A096LNT2 108 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 LRRN3E7EW58 273 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 C11orf98E9PRG8 122 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 hCG_2039718K7EN88 272 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 FBP2O00757 339 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 MRASO14807 208 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 RNF13O43567 381 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 MGRN1O60291 552 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 SEC14L2O76054 403 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 UBL3O95164 117 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 FARS2O95363 451 aaKnown RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 BCL10O95999 233 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 HLA-HP01893 362 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 CELA3BP08861 270 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 B4GALT1P15291 398 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 NR4A1P22736 598 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 IFNA8P32881 189 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 NR4A2P43354 598 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 GZMMP51124 257 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 RPS23P62266 143 aaKnown RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 SNTB2Q13425 540 aaKnown RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 GGTLC2Q14390 218 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 IQCCQ4KMZ1 466 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 RABL3Q5HYI8 236 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 PHYHD1Q5SRE7 291 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 C6orf52Q5T4I8 152 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 HDDC2Q7Z4H3 204 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 NANOGNBQ7Z5D8 188 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 RBM45Q8IUH3 476 aaKnown RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 TMEM54Q969K7 222 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 ZNF566Q969W8 418 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 SLC25A44Q96H78 314 aaPredicted RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 FOXN4Q96NZ1 517 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 DOK1Q99704 481 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 POLR2J3Q9H1A7 115 aaKnown RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 SEC61A2Q9H9S3 476 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 NOX3Q9HBY0 568 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 GID8Q9NWU2 228 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 GLTPQ9NZD2 209 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 STX18Q9P2W9 335 aaKnown RBP8.11□□□□□ -1.11
YBX3-218ENST00000546298 LPAR3Q9UBY5 353 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 CDC42EP3Q9UKI2 254 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 ADAM21Q9UKJ8 722 aa8.11□□□□□ -1.11
YBX3-218ENST00000546298 AP3M1Q9Y2T2 418 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms