RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 LINC00114Q6XXX2 140 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 NET1Q7Z628 596 aaPredicted RBP10.76□□□□□ -0.69
COPS7A-221ENST00000546229 UEVLDQ8IX04 471 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 PAQR4Q8N4S7 273 aaPredicted RBP10.76□□□□□ -0.69
COPS7A-221ENST00000546229 ANKRD42Q8N9B4 389 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 NFKBIDQ8NI38 313 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 ZFAND2BQ8WV99 257 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 DNAJA4Q8WW22 397 aaPredicted RBP10.76□□□□□ -0.69
COPS7A-221ENST00000546229 SYT3Q9BQG1 590 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 PARD6BQ9BYG5 372 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 RMND5AQ9H871 391 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 KCNK9Q9NPC2 374 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 G6PC2Q9NQR9 355 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF275Q9NSD4 429 aaPredicted RBP10.76□□□□□ -0.69
COPS7A-221ENST00000546229 REV1Q9UBZ9 1251 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 CORINQ9Y5Q5 1042 aa10.76□□□□□ -0.69
COPS7A-221ENST00000546229 IGLV3-9A0A075B6K5 115 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 B4DSR2 109 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 SLCO1B7G3V0H7 640 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 PLPP3O14495 311 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 WIPF1O43516 503 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 AKAP8O43823 692 aaKnown RBP10.75□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF500O60304 480 aaPredicted RBP10.75□□□□□ -0.69
COPS7A-221ENST00000546229 DEAF1O75398 565 aaPredicted RBP10.75□□□□□ -0.69
COPS7A-221ENST00000546229 ANP32DO95626 131 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 AVPP01185 164 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 GAAP10253 952 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 GTF2E2P29084 291 aaKnown RBP10.75□□□□□ -0.69
COPS7A-221ENST00000546229 GIPRP48546 466 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 ARFIP2P53365 341 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 PCBP3P57721 371 aaKnown RBP10.75□□□□□ -0.69
COPS7A-221ENST00000546229 C1DQ13901 141 aaKnown RBP10.75□□□□□ -0.69
COPS7A-221ENST00000546229 NPTX1Q15818 432 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TUSC1Q2TAM9 212 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM255AQ5JRV8 349 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 PAGE3Q5JUK9 113 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 NXNQ6DKJ4 435 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 ULK3Q6PHR2 472 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF813Q6ZN06 617 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM54Q969K7 222 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM186Q96B77 213 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TLCD1Q96CP7 247 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 FOXB1Q99853 325 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM43Q9BTV4 400 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 PLA2G12AQ9BZM1 189 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 DENND2DQ9H6A0 471 aaPredicted RBP10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TMEM38AQ9H6F2 299 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 ARMC7Q9H6L4 198 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 VAPAQ9P0L0 249 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 TANC2Q9HCD6 1990 aa10.75□□□□□ -0.69
COPS7A-221ENST00000546229 A0A0A6YYJ9 748 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 UBDO15205 165 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 TFP02787 698 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 ERCC1P07992 297 aaPredicted RBP10.74□□□□□ -0.69
COPS7A-221ENST00000546229 MSMBP08118 114 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 PATE4P0C8F1 98 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 SAGP10523 405 aaPredicted RBP10.74□□□□□ -0.69
COPS7A-221ENST00000546229 CD79AP11912 226 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 TCN1P20061 433 aaPredicted RBP10.74□□□□□ -0.69
COPS7A-221ENST00000546229 SRP14P37108 136 aaKnown RBP10.74□□□□□ -0.69
COPS7A-221ENST00000546229 CDH12P55289 794 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 CDK6Q00534 326 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 PIGFQ07326 219 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 CAMK2DQ13557 499 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 OR1Q1Q15612 314 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 GCNT6Q5T4J0 391 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 SWT1Q5T5J6 900 aaKnown RBP10.74□□□□□ -0.69
COPS7A-221ENST00000546229 HHATQ5VTY9 493 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 BLOC1S3Q6QNY0 202 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 EPGNQ6UW88 154 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 PXKQ7Z7A4 578 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 GLCCI1Q86VQ1 547 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 SKA3Q8IX90 412 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 MIER2Q8N344 545 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 GOLGA6L1Q8N7Z2 621 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 GPR32P1Q8NGA4 272 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 RDH5Q92781 318 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 SLC47A1Q96FL8 570 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 TSPAN32Q96QS1 320 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 PAIP2Q9BPZ3 127 aaKnown RBP10.74□□□□□ -0.69
COPS7A-221ENST00000546229 CPPED1Q9BRF8 314 aaPredicted RBP10.74□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF426Q9BUY5 554 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 ULBP2Q9BZM5 246 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF385DQ9H6B1 395 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 TCF7L2Q9NQB0 619 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 HIF1ANQ9NWT6 349 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 FZR1Q9UM11 496 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 NOX1Q9Y5S8 564 aa10.74□□□□□ -0.69
COPS7A-221ENST00000546229 ERLIN1O75477 346 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 MFN2O95140 757 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 CLPTM1O96005 669 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 FSHBP01225 129 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 NAT2P11245 290 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 ZNF250P15622 560 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 GPX2P18283 190 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 MAGEB1P43366 347 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 GPR6P46095 362 aaPredicted RBP10.73□□□□□ -0.69
COPS7A-221ENST00000546229 CAPZA2P47755 286 aa10.73□□□□□ -0.69
COPS7A-221ENST00000546229 PTDSS1P48651 473 aaKnown RBP10.73□□□□□ -0.69
COPS7A-221ENST00000546229 RAB1AP62820 205 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms