RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 IER3IP1Q9Y5U9 82 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 NBASA2RRP1 2371 aa14.26□□□□□ -0.13
PRPF40A-212ENST00000545856 ALPK2Q86TB3 2170 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 INTS1Q8N201 2190 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 SH3D21A4FU49 640 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF726A6NNF4 738 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF814B7Z6K7 855 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 CNOT4O95628 575 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 IFNGR1P15260 489 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 POLR2IP36954 125 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 BLVRAP53004 296 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC25A1P53007 311 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 ERVK-25P63136 954 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 CSNK2BP67870 215 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 MED21Q13503 144 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 TMEM201Q5SNT2 666 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 RIPPLY2Q5TAB7 128 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 TMEM211Q6ICI0 200 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 ACSM5Q6NUN0 579 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 DNM1P34Q6PK57 102 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 GID4Q8IVV7 300 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 CCDC103Q8IW40 242 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 MARVELD2Q8N4S9 558 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 FAM26EQ8N5C1 309 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 TMEM163Q8TC26 289 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 RFKQ969G6 155 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 VSX1Q9NZR4 365 aaPredicted RBP14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF346Q9UL40 294 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 EMC9Q9Y3B6 208 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 CHD6Q8TD26 2715 aa14.25□□□□□ -0.13
PRPF40A-212ENST00000545856 TEX13CA0A0J9YWL9 993 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 PRODHO43272 600 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF432O94892 652 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 PLGP00747 810 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 RENP00797 406 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 IGFBP1P08833 259 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 CRABP1P29762 137 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ACVR1BP36896 505 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF133P52736 654 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 CXCR4P61073 352 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 GUSBP1Q15486 140 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 OCLNQ16625 522 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 PRR30Q53SZ7 412 aaPredicted RBP14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 C6orf52Q5T4I8 152 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF585AQ6P3V2 769 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 PTCHD4Q6ZW05 846 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 GALNT11Q8NCW6 608 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 RHOXF1Q8NHV9 184 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ABHD3Q8WU67 409 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 FBLIM1Q8WUP2 373 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ROBO4Q8WZ75 1007 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ZNF566Q969W8 418 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 Q96M85 177 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 TRIB1Q96RU8 372 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 KCNK17Q96T54 332 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 MRPL13Q9BYD1 178 aaKnown RBP14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 LINC00470Q9BZP3 86 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ENKD1Q9H0I2 346 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 TVP23BQ9NYZ1 205 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 ADAM18Q9Y3Q7 739 aa14.24□□□□□ -0.13
PRPF40A-212ENST00000545856 IGHV3-15A0A0B4J1V0 119 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 PRSS37A4D1T9 235 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 PRR23D1E9PI22 279 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 E9PLN8 166 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC43A1O75387 559 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 AQP8O94778 261 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 IL18BPO95998 194 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 IL2RAP01589 272 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 PRR23D2P0DMB1 279 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 ISL1P61371 349 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 LGALS3BPQ08380 585 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 C3AR1Q16581 482 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 MESTQ5EB52 335 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC35D3Q5M8T2 416 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 THEM4Q5T1C6 240 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 NXNL2Q5VZ03 156 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 KRT80Q6KB66 452 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 FAM214BQ7L5A3 538 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 IQCF1Q8N6M8 205 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 POMGNT2Q8NAT1 580 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 OR5M9Q8NGP3 310 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 OR6K3Q8NGY3 331 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 DNAJA3Q96EY1 480 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 MUS81Q96NY9 551 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 RBP7Q96R05 134 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 VKORC1Q9BQB6 163 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 B3GAT2Q9NPZ5 323 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 TNFRSF10DQ9UBN6 386 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 IL20RAQ9UHF4 553 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 ING1Q9UK53 422 aaPredicted RBP14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 MOKQ9UQ07 419 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 NOSIPQ9Y314 301 aaKnown RBP14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 FKBP7Q9Y680 259 aa14.23□□□□□ -0.13
PRPF40A-212ENST00000545856 SLC22A31A6NKX4 558 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 RAMP1O60894 148 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 MRPL33O75394 65 aaKnown RBP14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 TGM6O95932 706 aa14.22□□□□□ -0.13
PRPF40A-212ENST00000545856 PGA4P0DJD7 388 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms