RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PAQR9Q6ZVX9 377 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 HSD11B1LQ7Z5J1 315 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 KIR2DL5AQ8N109 375 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 DAW1Q8N136 415 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 TMCO5AQ8N6Q1 288 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 ZNF740Q8NDX6 193 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 STKLD1Q8NE28 680 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 OR52I1Q8NGK6 324 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 MRPS31Q92665 395 aaKnown RBP2.51□□□□□ -2.01
SNHG1-224ENST00000545688 OTUB2Q96DC9 234 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 SENP8Q96LD8 212 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 MTMR9Q96QG7 549 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 CCDC94Q9BW85 323 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-224ENST00000545688 TM9SF3Q9HD45 589 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 IL37Q9NZH6 218 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 GALPQ9UBC7 116 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 UXTQ9UBK9 157 aaPredicted RBP2.51□□□□□ -2.01
SNHG1-224ENST00000545688 RIMS3Q9UJD0 308 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 MAB21L2Q9Y586 359 aa2.51□□□□□ -2.01
SNHG1-224ENST00000545688 ANKHD1Q8IWZ3 2542 aaKnown RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 MYLKQ15746 1914 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 ANK1P16157 1881 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 PHLPP2Q6ZVD8 1323 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 MYOFQ9NZM1 2061 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 NIPBLQ6KC79 2804 aaeCLIP2.5□□□□□ -2.018e-27■■■■□ 21.5
SNHG1-224ENST00000545688 FAM92AA1XBS5 289 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 WASH3PC4AMC7 463 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 SLC9A3R1O14745 358 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 YKT6O15498 198 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 TOM1L1O75674 476 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 LDOC1O95751 146 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 CLTAP09496 248 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 CASP3P42574 277 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 HTR5AP47898 357 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 DUSP3P51452 185 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 OSTNP61366 133 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 RPL10AP62906 217 aaKnown RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 KRT83P78385 493 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 IGFBP7Q16270 282 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 CDKN3Q16667 212 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 ZNF674Q2M3X9 581 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 PAGE3Q5JUK9 113 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 SDHAF4Q5VUM1 108 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 GALNT17Q6IS24 598 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 ARSKQ6UWY0 536 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 RNF165Q6ZSG1 346 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM25Q86YD3 366 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 ZBTB8OSQ8IWT0 167 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 SAXO1Q8IYX7 474 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 BLIDQ8IZY5 108 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM61Q8N0U2 210 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 SLC25A45Q8N413 288 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 CCDC148Q8NFR7 591 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 OR1E3Q8WZA6 343 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 PTP4A1Q93096 173 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 FAM131CQ96AQ9 280 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 ZNF560Q96MR9 790 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 COQ7Q99807 217 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 DESI2Q9BSY9 194 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 RNF126Q9BV68 326 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 NUP58Q9BVL2 599 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 NACA2Q9H009 215 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 SIRPDQ9H106 197 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 PAK1IP1Q9NWT1 392 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 DEC1Q9P2X7 70 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 PRPF19Q9UMS4 504 aaKnown RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 GMPPBQ9Y5P6 360 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 U3KQA8 63 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 POLEQ07864 2286 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 ANAPC1Q9H1A4 1944 aa2.5□□□□□ -2.01
SNHG1-224ENST00000545688 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
SNHG1-224ENST00000545688 NKX2-6A6NCS4 301 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 GJE1A6NN92 205 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 CASKO14936 926 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 NBR2O15453 112 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 RIPK2O43353 540 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 TRIM3O75382 744 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-224ENST00000545688 GP1BAP07359 652 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 ZDHHC11BP0C7U3 371 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 CXCL8P10145 99 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 THRBP10828 461 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 MUTP22033 750 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 CYP2F1P24903 491 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 ATP5DP30049 168 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 KDSRQ06136 332 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 MADCAM1Q13477 382 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 PDIA5Q14554 519 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 NSDHLQ15738 373 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM52BQ4KMG9 183 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 BBS7Q8IWZ6 715 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 EID2Q8N6I1 236 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 NKAIN3Q8N8D7 197 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM161BQ8NDZ6 487 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 DNAJA4Q8WW22 397 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-224ENST00000545688 HTR3CQ8WXA8 447 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 KIFAP3Q92845 792 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 TCEANC2Q96MN5 208 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 CCNL2Q96S94 520 aaPredicted RBP2.49□□□□□ -2.01
SNHG1-224ENST00000545688 ACBD6Q9BR61 282 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 COG4Q9H9E3 785 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms