RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 PRDM13Q9H4Q3 707 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 GPR35Q9HC97 309 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 C1orf109Q9NX04 203 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 MKLN1Q9UL63 735 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 FIS1Q9Y3D6 152 aa12.97□□□□□ -0.33
CLSTN3-216ENST00000545663 LYPLA1O75608 230 aaPredicted RBP12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 MPIG6BO95866 241 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 CD79AP11912 226 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 FKBP2P26885 142 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 IDH2P48735 452 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 P2RY4P51582 365 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 TEKQ02763 1124 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 TP53BP2Q13625 1128 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 CEACAM16Q2WEN9 425 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 PCGF3Q3KNV8 242 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 MMEL1Q495T6 779 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 TMEM225Q6GV28 225 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 Q6YL49 198 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 EIF3MQ7L2H7 374 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 R3HCC1LQ7Z5L2 792 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 CLHC1Q8NHS4 586 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 AGR3Q8TD06 166 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 PPP1R14AQ96A00 147 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 DDIT4LQ96D03 193 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 LINC00470Q9BZP3 86 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 DECR2Q9NUI1 292 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 GPATCH2Q9NW75 528 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 DCAF16Q9NXF7 216 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 EGFL7Q9UHF1 273 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 OSGIN1Q9UJX0 560 aa12.96□□□□□ -0.33
CLSTN3-216ENST00000545663 HYDINQ4G0P3 5121 aa12.96□□□□□ -0.34
CLSTN3-216ENST00000545663 DSPPQ9NZW4 1301 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 TRAV40A0A0B4J280 105 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 AGAP5A6NIR3 686 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 LIPT2A6NK58 231 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 RPL36A-HNRNPH2H7BZ11 118 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 AP3D1O14617 1153 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 SEC22BO75396 215 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 ARRB2P32121 409 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 SLC6A9P48067 706 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 GALK2Q01415 458 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 PLAURQ03405 335 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 COL10A1Q03692 680 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 XKR7Q5GH72 579 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 PRAMEF8Q5VWM4 474 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 PRAMEF7Q5VXH5 474 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 ZNF620Q6ZNG0 422 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 KDM8Q8N371 416 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 FAM71CQ8NEG0 241 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 STON2Q8WXE9 905 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 OR7D2Q96RA2 312 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 C20orf27Q9GZN8 174 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 REEP4Q9H6H4 257 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 MRGBPQ9NV56 204 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 NKIRAS2Q9NYR9 191 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 BAIAP2L1Q9UHR4 511 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 PCDHGB4Q9UN71 923 aa12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 FAF1Q9UNN5 650 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 POLR3KQ9Y2Y1 108 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-216ENST00000545663 CLDN24A6NM45 220 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 DHHO43323 396 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 ZNF208O43345 1280 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 SBK2P0C263 348 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 LINC00032P0C843 101 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 TACR3P29371 465 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 ERVS71-1P61550 626 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 RPS23P62266 143 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 RPS26P62854 115 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 GLO1Q04760 184 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 GSG1Q2KHT4 349 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 PMM1Q92871 262 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 TUBGCP3Q96CW5 907 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 OR51B6Q9H340 312 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 MEAF6Q9HAF1 191 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 SAP30LQ9HAJ7 183 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 TNFRSF12AQ9NP84 129 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 ADPRHL2Q9NX46 363 aa12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 GAR1Q9NY12 217 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-216ENST00000545663 TMEM233B4DJY2 109 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 LSM1O15116 133 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 SCN2BO60939 215 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 GPIP06744 558 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 MELTFP08582 738 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 FAM157BP0CG42 384 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 RPL3P39023 403 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 PTDSS1P48651 473 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 CCT3P49368 545 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 KIAA0040Q15053 153 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 SPRNQ5BIV9 151 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 PHYHD1Q5SRE7 291 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 UPRTQ96BW1 309 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 ZG16BQ96DA0 208 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 ITPKCQ96DU7 683 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 TSSK3Q96PN8 268 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 DCLRE1CQ96SD1 692 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 TUBB1Q9H4B7 451 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 PIF1Q9H611 641 aa12.93□□□□□ -0.34
CLSTN3-216ENST00000545663 PNPOQ9NVS9 261 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms