RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 NPR2P20594 1047 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 PRKAR1BP31321 381 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 PPOXP50336 477 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 SH3BGRP55822 239 aaPredicted RBP7.32□□□□□ -1.24
USP28-215ENST00000545608 MSMPQ1L6U9 139 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 ALG10BQ5I7T1 473 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 PAGE3Q5JUK9 113 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 FAM120AOSQ5T036 256 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 LRIF1Q5T3J3 769 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 FAM69AQ5T7M9 428 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 DHRS4L2Q6PKH6 230 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 NHLRC1Q6VVB1 395 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 H1FNTQ75WM6 255 aaPredicted RBP7.32□□□□□ -1.24
USP28-215ENST00000545608 SPATA21Q7Z572 469 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 NET1Q7Z628 596 aaPredicted RBP7.32□□□□□ -1.24
USP28-215ENST00000545608 MDP1Q86V88 176 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 WDFY1Q8IWB7 410 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 TMEM123Q8N131 208 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 SVOPLQ8N434 492 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 SLC38A4Q969I6 547 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 TXNDC15Q96J42 360 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 OR2M2Q96R28 347 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 WFDC6Q9BQY6 131 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 EMC6Q9BV81 110 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 RAB1BQ9H0U4 201 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 RAD21L1Q9H4I0 556 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 ZNF442Q9H7R0 627 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 TMBIM4Q9HC24 238 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 CRLF2Q9HC73 371 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 MYOZ1Q9NP98 299 aaPredicted RBP7.32□□□□□ -1.24
USP28-215ENST00000545608 SLC52A3Q9NQ40 469 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 KLHL14Q9P2G3 628 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 CORINQ9Y5Q5 1042 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 USH1CQ9Y6N9 552 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 MALRD1Q5VYJ5 2156 aa7.32□□□□□ -1.24
USP28-215ENST00000545608 A0A087WUJ7 227 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 ZNF99A8MXY4 864 aaPredicted RBP7.31□□□□□ -1.24
USP28-215ENST00000545608 LRRN3E7EW58 273 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 H0YHG0 523 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 M0R3G1 203 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 TGFAP01135 160 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 BGLAPP02818 100 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 DAOP14920 347 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 SRD5A1P18405 259 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 IL2RGP31785 369 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 THBS2P35442 1172 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 ARR3P36575 388 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 MRPL19P49406 292 aaKnown RBP7.31□□□□□ -1.24
USP28-215ENST00000545608 CDK6Q00534 326 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 IL1RL1Q01638 556 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 NPRL3Q12980 569 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 OR1Q1Q15612 314 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 GCNT6Q5T4J0 391 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 CARD17Q5XLA6 110 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 KRT80Q6KB66 452 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 REEP3Q6NUK4 255 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 ULK3Q6PHR2 472 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 C5orf46Q6UWT4 87 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 UEVLDQ8IX04 471 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 C20orf196Q8IYI0 205 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 CDK20Q8IZL9 346 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 PIK3C3Q8NEB9 887 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 DNAJA4Q8WW22 397 aaPredicted RBP7.31□□□□□ -1.24
USP28-215ENST00000545608 NEU4Q8WWR8 484 aaPredicted RBP7.31□□□□□ -1.24
USP28-215ENST00000545608 SPDL1Q96EA4 605 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 SLC47A1Q96FL8 570 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 SLC41A3Q96GZ6 507 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 ZNF75AQ96N20 296 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 EBF4Q9BQW3 602 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 IKZF5Q9H5V7 419 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 NOX3Q9HBY0 568 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 MOV10Q9HCE1 1003 aaKnown RBP7.31□□□□□ -1.24
USP28-215ENST00000545608 MED29Q9NX70 200 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 B3GNT2Q9NY97 397 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 VAPAQ9P0L0 249 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 ADAM30Q9UKF2 790 aa7.31□□□□□ -1.24
USP28-215ENST00000545608 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.3□□□□□ -1.248e-9■■■■□ 25.3
USP28-215ENST00000545608 TRBV5-3A0A0A0MS03 114 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 A0A0B4J2E0 115 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 A0A1B0GX12 115 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 VSTM5A8MXK1 200 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 LYNX1G3V0Z9 82 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 AKAP8O43823 692 aaKnown RBP7.3□□□□□ -1.24
USP28-215ENST00000545608 HLA-HP01893 362 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 ADRA2AP08913 450 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 TACSTD2P09758 323 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 LYNX1P0DP58 116 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 NQO1P15559 274 aaKnown RBP7.3□□□□□ -1.24
USP28-215ENST00000545608 NR4A1P22736 598 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 GIFP27352 417 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 AQP1P29972 269 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 CAPZA2P47755 286 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 AQP5P55064 265 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 STX1BP61266 288 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 PIGFQ07326 219 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 SNTB2Q13425 540 aaKnown RBP7.3□□□□□ -1.24
USP28-215ENST00000545608 SCARB2Q14108 478 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 DAG1Q14118 895 aa7.3□□□□□ -1.24
USP28-215ENST00000545608 ADRM1Q16186 407 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms