RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 AAED1Q7RTV5 226 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 YTHDF3Q7Z739 585 aaKnown RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 BIVMQ86UB2 503 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 GPAT4Q86UL3 456 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 PTOV1Q86YD1 416 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 GLB1L2Q8IW92 636 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 ADPRHL1Q8NDY3 354 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 OR52E4Q8NGH9 312 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 LILRB1Q8NHL6 650 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 PERPQ96FX8 193 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 BOD1Q96IK1 185 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 C18orf12Q96KH6 178 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 MUS81Q96NY9 551 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF385AQ96PM9 386 aaKnown RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF317Q96PQ6 595 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 RSPO3Q9BXY4 272 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 CCDC134Q9H6E4 229 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 KAT8Q9H7Z6 458 aaKnown RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 BARX1Q9HBU1 254 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 OBP2BQ9NPH6 170 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 SLC7A10Q9NS82 523 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 FGFR1OP2Q9NVK5 253 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 FAIMQ9NVQ4 179 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF446Q9NWS9 450 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 SELENONQ9NZV5 590 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 UPB1Q9UBR1 384 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 MGAT4BQ9UQ53 548 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 RCE1Q9Y256 329 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 B3GALT5Q9Y2C3 310 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 AMDHD2Q9Y303 409 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 MAGED1Q9Y5V3 778 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-223ENST00000545440 SLC25A15Q9Y619 301 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 ABCA1O95477 2261 aa6.73□□□□□ -1.33
SNHG1-223ENST00000545440 IGKV1D-42A0A075B6H8 117 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 TRAV36DV7A0A075B6V5 113 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 A0A087WUJ7 227 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 DPRXA6NFQ7 191 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 SHISA9B4DS77 424 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF587BE7ETH6 402 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 OVOL3O00110 214 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 FXYD1O00168 92 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 FBP2O00757 339 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 ABCD4O14678 606 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 AIM2O14862 343 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 AKAP8O43823 692 aaKnown RBP6.72□□□□□ -1.33
SNHG1-223ENST00000545440 MPIG6BO95866 241 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 NPPAP01160 153 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 INHBBP09529 407 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 DANCRP0C864 163 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 PAX7P23759 505 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 THBS2P35442 1172 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 RPS5P46782 204 aaKnown RBP6.72□□□□□ -1.33
SNHG1-223ENST00000545440 CDH11P55287 796 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 SH3BGRP55822 239 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-223ENST00000545440 LGALS4P56470 323 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 IL13RA1P78552 427 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 SELPLGQ14242 412 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 MFSD13AQ14CX5 517 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 PDCD1Q15116 288 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 MAPRE2Q15555 327 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 ETFDHQ16134 617 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 HSP90B2PQ58FF3 399 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 TOR2AQ5JU69 321 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 INTS11Q5TA45 600 aaKnown RBP6.72□□□□□ -1.33
SNHG1-223ENST00000545440 ZNF613Q6PF04 617 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 KLHL24Q6TFL4 600 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 CREB3L2Q70SY1 520 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 PATL1Q86TB9 770 aaKnown RBP6.72□□□□□ -1.33
SNHG1-223ENST00000545440 DTX2Q86UW9 622 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 EPHX4Q8IUS5 362 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 ZIC4Q8N9L1 334 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 SCAIQ8N9R8 606 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 OR8J3Q8NGG0 315 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 OR6S1Q8NH40 331 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 OR52N5Q8NH56 324 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 RASSF5Q8WWW0 418 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 KTI12Q96EK9 354 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-223ENST00000545440 SLC47A1Q96FL8 570 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 ALKBH3Q96Q83 286 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-223ENST00000545440 EPYCQ99645 322 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 ARHGDIGQ99819 225 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 SH3GL1Q99961 368 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM43Q9BTV4 400 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 LINC00470Q9BZP3 86 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 MS4A5Q9H3V2 200 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 TMEM27Q9HBJ8 222 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 GCM1Q9NP62 436 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 MED4Q9NPJ6 270 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 SLC17A5Q9NRA2 495 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 B3GAT1Q9P2W7 334 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 LAMP3Q9UQV4 416 aa6.72□□□□□ -1.33
SNHG1-223ENST00000545440 CSPG4Q6UVK1 2322 aa6.71□□□□□ -1.33
SNHG1-223ENST00000545440 LOC102725191A0A1B0GVB3 256 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 FAM171A2A8MVW0 826 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 M0R3H8 397 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 SLC22A2O15244 555 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 CHP2O43745 196 aa6.71□□□□□ -1.34
SNHG1-223ENST00000545440 TPST2O60704 377 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms