RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 CIDECQ96AQ7 238 aaPredicted RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 VPS33AQ96AX1 596 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 PPWD1Q96BP3 646 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 NEURL3Q96EH8 262 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 FAM120BQ96EK7 910 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 NSL1Q96IY1 281 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 STACQ99469 402 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ACKR4Q9NPB9 350 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 DUSP22Q9NRW4 184 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ZCCHC3Q9NUD5 404 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 BCAP29Q9UHQ4 241 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 MRTO4Q9UKD2 239 aaKnown RBP5.87□□□□□ -1.47
LDHA-223ENST00000545215 HSF4Q9ULV5 492 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 ERVK-19Q9WJR5 959 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 C15orf41Q9Y2V0 281 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 SNX8Q9Y5X2 465 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 HERC1Q15751 4861 aa5.87□□□□□ -1.47
LDHA-223ENST00000545215 C2orf92A0A1B0GVN3 265 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 MARCH11A6NNE9 402 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 NDUFS8O00217 210 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CLIC1O00299 241 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 TO15178 435 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 TGM6O95932 706 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 GUSBP08236 651 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 ALOX5P09917 674 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CCL3P10147 92 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 POU2F1P14859 743 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 S1PR1P21453 382 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 DRD5P21918 477 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 S100A5P33763 92 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 SOAT1P35610 550 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 DNASE1L1P49184 302 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 KHKP50053 298 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CDK9P50750 372 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 KCNJ2P63252 427 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 RPP38P78345 283 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 CRYZQ08257 329 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 RBBP4Q09028 425 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 LTB4RQ15722 352 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 TSTQ16762 297 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 ZNF672Q499Z4 452 aaPredicted RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 TRMT12Q53H54 448 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 ATAD3BQ5T9A4 648 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 SAXO2Q658L1 398 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 REP15Q6BDI9 236 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 MFSD12Q6NUT3 480 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CDC73Q6P1J9 531 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 SLC2A7Q6PXP3 512 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 TMEM107Q6UX40 140 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 C16orf89Q6UX73 402 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CCDC121Q6ZUS5 278 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 ANKRD46Q86W74 232 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 SLC30A8Q8IWU4 369 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CLECL1Q8IZS7 167 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 GALNT4Q8N4A0 578 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 ZNF615Q8N8J6 731 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 OR7G2Q8NG99 324 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 OR52R1Q8NGF1 315 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 ZPLD1Q8TCW7 415 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 ZFP90Q8TF47 636 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 NEUROG1Q92886 237 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 UCN3Q969E3 161 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 POP5Q969H6 163 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 INTS12Q96CB8 462 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 LRRC58Q96CX6 371 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 RCN3Q96D15 328 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 RNF125Q96EQ8 232 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CGREF1Q99674 301 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 SLC35A5Q9BS91 424 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 LMF2Q9BU23 707 aaKnown RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 C1QTNF5Q9BXJ0 243 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 ACTRT3Q9BYD9 372 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 C1orf21Q9H246 121 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 VCXQ9H320 206 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 PIGUQ9H490 435 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 TPT1P8Q9HAU6 139 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 PLEKHA2Q9HB19 425 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 Q9N2J8 555 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 TRIM36Q9NQ86 728 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 POLE3Q9NRF9 147 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 SIRT3Q9NTG7 399 aaPredicted RBP5.86□□□□□ -1.47
LDHA-223ENST00000545215 EXD2Q9NVH0 621 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 CALML5Q9NZT1 146 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 STEAP1Q9UHE8 339 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 RNF115Q9Y4L5 304 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 PPIAL4AQ9Y536 164 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 NINQ8N4C6 2090 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 DNAH9Q9NYC9 4486 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 FRAS1Q86XX4 4008 aa5.86□□□□□ -1.47
LDHA-223ENST00000545215 PLCE1Q9P212 2302 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 TRBV5-3A0A0A0MS03 114 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 C9JVG2 144 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 FBP2O00757 339 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PFDN1O60925 122 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 TNFSF13O75888 250 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 NKX2-2O95096 273 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 HMGN2P05204 90 aaKnown RBP5.85□□□□□ -1.47
LDHA-223ENST00000545215 CT62P0C5K7 136 aa5.85□□□□□ -1.47
LDHA-223ENST00000545215 PPP3CBP16298 524 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms