RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 TMEM53Q6P2H8 277 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ARL9Q6T311 187 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CLEC2AQ6UVW9 174 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 UGT2A3Q6UWM9 527 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF730Q6ZMV8 503 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC35D2Q76EJ3 337 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CALHM3Q86XJ0 350 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ARHGAP24Q8N264 748 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 LINC00471Q8N535 108 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 OR1K1Q8NGR3 316 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 TMEM239Q8WW34 195 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 DNAJA3Q96EY1 480 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PERPQ96FX8 193 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PRRC1Q96M27 445 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF583Q96ND8 569 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF385AQ96PM9 386 aaKnown RBP4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 KLHDC3Q9BQ90 382 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 PTDSS2Q9BVG9 487 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 RAB1BQ9H0U4 201 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ANKRD19PQ9H560 264 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 IKZF5Q9H5V7 419 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CRLF2Q9HC73 371 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 GPR35Q9HC97 309 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 INIPQ9NRY2 104 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 CBLN4Q9NTU7 201 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 GLTPQ9NZD2 209 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 ARMCX1Q9P291 453 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 MAGEL2Q9UJ55 1249 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 RIMS3Q9UJD0 308 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 TMCC3Q9ULS5 477 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 VPS13CQ709C8 3753 aa4.92□□□□□ -1.62
CLSTN3-215ENST00000544584 KIAA1549Q9HCM3 1950 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 DSCAMO60469 2012 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 IQCMA0A1B0GVH7 501 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SH3PXD2BA1X283 911 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC35F4A4IF30 521 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 DPRXA6NFQ7 191 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 NPIPB13A6NJU9 1138 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 B9A039 149 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 NPIPB4C9JG80 1138 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 C11orf98E9PRG8 122 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 MS4A18H0YCH9 400 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 M0R3G1 203 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 AHCYL1O43865 530 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SNX3O60493 162 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 OR7A10O76100 309 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF432O94892 652 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SERPINA1P01009 418 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 HEXAP06865 529 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 INHBBP09529 407 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 OR8G3PP0DMU2 310 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 CBR1P16152 277 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 RHCEP18577 417 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 FUT1P19526 365 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 CBLP22681 906 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 TTKP33981 857 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SERPINF1P36955 418 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SELENOPP49908 381 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 P2RY4P51582 365 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SLC7A2P52569 658 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 NUDT6P53370 316 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 BIDP55957 195 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 PSME3P61289 254 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 GNGT1P63211 74 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 VLDLRP98155 873 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 EGR4Q05215 589 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 SELPLGQ14242 412 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 TSC22D1Q15714 1073 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF74Q16587 644 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 GSG1Q2KHT4 349 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 CEACAM16Q2WEN9 425 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 MS4A18Q3C1V0 323 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 TBRG1Q3YBR2 411 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 GLIPR1L2Q4G1C9 344 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 THEM4Q5T1C6 240 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 C9orf135Q5VTT2 229 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 CARD17Q5XLA6 110 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 LINC00114Q6XXX2 140 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF813Q6ZN06 617 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 CBLL1Q75N03 491 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 OAFQ86UD1 273 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 DTX2Q86UW9 622 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 EPHX4Q8IUS5 362 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 C20orf196Q8IYI0 205 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ALDH16A1Q8IZ83 802 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 POU5F2Q8N7G0 328 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ZIC4Q8N9L1 334 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 NUP37Q8NFH4 326 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 NRGNQ92686 78 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 TAMM41Q96BW9 452 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF524Q96C55 264 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 BPIFA2Q96DR5 249 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ALKBH3Q96Q83 286 aaPredicted RBP4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 OR2M2Q96R28 347 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 ZNF347Q96SE7 839 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 FOXB1Q99853 325 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 WACQ9BTA9 647 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 MUC13Q9H3R2 512 aa4.91□□□□□ -1.62
CLSTN3-215ENST00000544584 LIME1Q9H400 295 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms