RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 NELFAQ9H3P2 528 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 LYVE1Q9Y5Y7 322 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 SLC25A15Q9Y619 301 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 CADP27708 2225 aa16.79■□□□□ 0.28
DDX55-211ENST00000544429 AKAP6Q13023 2319 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 PTP4A3O75365 173 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 F13BP05160 661 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 PGA4P0DJD7 388 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 PGA3P0DJD8 388 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 HOXB6P17509 224 aaKnown RBP16.78■□□□□ 0.28
DDX55-211ENST00000544429 BIDP55957 195 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 ROR2Q01974 943 aaKnown RBP16.78■□□□□ 0.28
DDX55-211ENST00000544429 TGFBR3Q03167 851 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 CHRNB3Q05901 458 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 FLOT2Q14254 428 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 ARMC4Q5T2S8 1044 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 ZNF627Q7L945 461 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 RRM2BQ7LG56 351 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 ZER1Q7Z7L7 766 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 OAFQ86UD1 273 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 CDK20Q8IZL9 346 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 WDR31Q8NA23 367 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 OR13C2Q8NGS9 318 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 CANT1Q8WVQ1 401 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 ASB10Q8WXI3 467 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 TMEM54Q969K7 222 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 ZNF837Q96EG3 531 aaPredicted RBP16.78■□□□□ 0.28
DDX55-211ENST00000544429 SLC25A44Q96H78 314 aaPredicted RBP16.78■□□□□ 0.28
DDX55-211ENST00000544429 FAM46AQ96IP4 442 aaKnown RBP16.78■□□□□ 0.28
DDX55-211ENST00000544429 LRGUKQ96M69 825 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 ALPK1Q96QP1 1244 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 TNFRSF13CQ96RJ3 184 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 GPA33Q99795 319 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 MRPL13Q9BYD1 178 aaKnown RBP16.78■□□□□ 0.28
DDX55-211ENST00000544429 GPR35Q9HC97 309 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 INIPQ9NRY2 104 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 SIGLEC7Q9Y286 467 aa16.78■□□□□ 0.28
DDX55-211ENST00000544429 TRAV27A0A087WT01 109 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 DHRS12A0PJE2 317 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 CIB4A0PJX0 185 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 CENPBD1B2RD01 187 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 CLOCKO15516 846 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 SERPINI2O75830 405 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 SAGP10523 405 aaPredicted RBP16.77■□□□□ 0.28
DDX55-211ENST00000544429 SH3BGRP55822 239 aaPredicted RBP16.77■□□□□ 0.28
DDX55-211ENST00000544429 FXYD6P3P58550 94 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 CAMK2DQ13557 499 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 STK11Q15831 433 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 ACKR1Q16570 336 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 ZBED5Q49AG3 693 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 ALG10Q5BKT4 473 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 C9orf135Q5VTT2 229 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 GPR137CQ8N3F9 429 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 PAPD5Q8NDF8 572 aaKnown RBP16.77■□□□□ 0.28
DDX55-211ENST00000544429 OR1K1Q8NGR3 316 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 OR51A7Q8NH64 312 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 MAGEE2Q8TD90 523 aaPredicted RBP16.77■□□□□ 0.28
DDX55-211ENST00000544429 BCL2L2Q92843 193 aaPredicted RBP16.77■□□□□ 0.28
DDX55-211ENST00000544429 TMEM204Q9BSN7 226 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 CLEC4MQ9H2X3 399 aaPredicted RBP16.77■□□□□ 0.28
DDX55-211ENST00000544429 TXNIPQ9H3M7 391 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 SLC17A5Q9NRA2 495 aa16.77■□□□□ 0.28
DDX55-211ENST00000544429 ROS1P08922 2347 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 TEX15Q9BXT5 2789 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.76■□□□□ 0.27
DDX55-211ENST00000544429 A0A1W2PRG6 482 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 ZNF726A6NNF4 738 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 KRT33AO76009 404 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 STAMBPO95630 424 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 BCL10O95999 233 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 DAP3P51398 398 aaKnown RBP16.76■□□□□ 0.27
DDX55-211ENST00000544429 ZNF133P52736 654 aaPredicted RBP16.76■□□□□ 0.27
DDX55-211ENST00000544429 PRPS1P60891 318 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 RUNX1T1Q06455 604 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 MELKQ14680 651 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 PPA1Q15181 289 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 TAF11Q15544 211 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 BEX5Q5H9J7 111 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 OR2T5Q6IEZ7 315 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 ZNF770Q6IQ21 691 aaPredicted RBP16.76■□□□□ 0.27
DDX55-211ENST00000544429 C1orf94Q6P1W5 598 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 TMEM200AQ86VY9 491 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 CDC20BQ86Y33 519 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 OR2T29Q8NH02 315 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 NMD3Q96D46 503 aaKnown RBP16.76■□□□□ 0.27
DDX55-211ENST00000544429 HS3ST6Q96QI5 342 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 GPX7Q96SL4 187 aaPredicted RBP16.76■□□□□ 0.27
DDX55-211ENST00000544429 CHID1Q9BWS9 393 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 POLDIP3Q9BY77 421 aaKnown RBP16.76■□□□□ 0.27
DDX55-211ENST00000544429 PLEKHF2Q9H8W4 249 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 CRLF2Q9HC73 371 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 VNN3Q9NY84 501 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 NPAP1Q9NZP6 1156 aa16.76■□□□□ 0.27
DDX55-211ENST00000544429 FPR3P25089 353 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 CSNK1A1P48729 337 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 CBX1P83916 185 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 CEACAM16Q2WEN9 425 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 CARD17Q5XLA6 110 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 HMBOX1Q6NT76 420 aa16.75■□□□□ 0.27
DDX55-211ENST00000544429 ANKRD16Q6P6B7 361 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms