RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FAPQ12884 760 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CLEC12AQ5QGZ9 265 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TSPO2Q5TGU0 170 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ANKRD34AQ69YU3 496 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF474Q6S9Z5 364 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 KLHL17Q6TDP4 642 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CD300LDQ6UXZ3 194 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 NHLRC1Q6VVB1 395 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 DPY19L2P2Q6ZN68 376 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 KIF18BQ86Y91 864 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GPR137CQ8N3F9 429 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 POMGNT2Q8NAT1 580 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OR6N1Q8NGY5 312 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OR6X1Q8NH79 312 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF566Q969W8 418 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF570Q96NI8 536 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ASB6Q9NWX5 421 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GALNT8Q9NY28 637 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ELOVL5Q9NYP7 299 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 STX18Q9P2W9 335 aaKnown RBP12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ADAM18Q9Y3Q7 739 aa12.8□□□□□ -0.36
TNFRSF1A-216ENST00000543995 NPIPB13A6NJU9 1138 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 NPIPB4C9JG80 1138 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 M0R3G1 203 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PDLIM1O00151 329 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CNOT4O95628 575 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 IGHG1P01857 330 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 NOS3P29474 1203 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ACVR1BP36896 505 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 HCFC1P51610 2035 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 LGALS3BPQ08380 585 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FAHD1Q6P587 224 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 Q6ZT83 130 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ABHD12BQ7Z5M8 362 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TMEM123Q8N131 208 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TEX47Q8TBZ9 253 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 DNAJC9Q8WXX5 260 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RNASE6Q93091 150 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SLC25A44Q96H78 314 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ERMAPQ96PL5 475 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ALKBH3Q96Q83 286 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TSPAN32Q96QS1 320 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GPX7Q96SL4 187 aaPredicted RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CIB1Q99828 191 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PLA2G12AQ9BZM1 189 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GABARAPL1Q9H0R8 117 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SMURF2Q9HAU4 748 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 B3GAT2Q9NPZ5 323 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 NRIP3Q9NQ35 241 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PAPOLBQ9NRJ5 636 aaKnown RBP12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SLC7A10Q9NS82 523 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 KRT84Q9NSB2 600 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 IL20Q9NYY1 176 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 POFUT2Q9Y2G5 429 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 IER3IP1Q9Y5U9 82 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CACNA1CQ13936 2221 aa12.79□□□□□ -0.36
TNFRSF1A-216ENST00000543995 A1L4Q6 167 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ZNF587BE7ETH6 402 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 XKRYO14609 159 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 UPK3AO75631 287 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 IGFBP1P08833 259 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ANPEPP15144 967 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ACADSP16219 412 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 POU1F1P28069 291 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CD79BP40259 229 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CSNK1A1P48729 337 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 DAPP51397 102 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FAM27E3Q08E93 113 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FBXL19-AS1Q494R0 122 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SLC36A3Q495N2 470 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ARMC4Q5T2S8 1044 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FAM205BPQ63HN1 556 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 GPR139Q6DWJ6 353 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 WDFY1Q8IWB7 410 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 CLDN22Q8N7P3 220 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 MAGEE2Q8TD90 523 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 EME1Q96AY2 570 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 Q96M85 177 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RBM4BQ9BQ04 359 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RBM4Q9BWF3 364 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TSSK6Q9BXA6 273 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 LINC00470Q9BZP3 86 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 DCLRE1BQ9H816 532 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 REV1Q9UBZ9 1251 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 MALT1Q9UDY8 824 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 FOXD3Q9UJU5 478 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 UBR5O95071 2799 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TEX13CA0A0J9YWL9 993 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 A6NIZ1 184 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PRSS44E7EML9 344 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SOCS2O14508 198 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 ARHGEF9O43307 516 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 TRMUO75648 421 aaKnown RBP12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PGA4P0DJD7 388 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 PGA3P0DJD8 388 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 OSMP13725 252 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 SDHAP31040 664 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RAP1BP61224 184 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RAP1AP62834 184 aa12.78□□□□□ -0.36
TNFRSF1A-216ENST00000543995 RUNX1T1Q06455 604 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms