RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 F5H5K5 113 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF705DP0CH99 300 aaPredicted RBP17.86■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF705BP0CI00 300 aaPredicted RBP17.86■□□□□ 0.45
SUDS3-204ENST00000543473 CALCBP10092 127 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 CNR1P21554 472 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 UBE2KP61086 200 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 NFATC4Q14934 902 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 EEF1A1P5Q5VTE0 462 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 TMEFF1Q8IYR6 380 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 CMTM4Q8IZR5 234 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 BCL7CQ8WUZ0 217 aaPredicted RBP17.86■□□□□ 0.45
SUDS3-204ENST00000543473 MYEOVQ96EZ4 313 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 GIMAP5Q96F15 307 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 DEFB126Q9BYW3 111 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 LMAN1LQ9HAT1 526 aa17.86■□□□□ 0.45
SUDS3-204ENST00000543473 MICAL3Q7RTP6 2002 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 COL4A5P29400 1685 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 HRO43593 1189 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 OR13C5Q8NGS8 318 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 OR13C9Q8NGT0 318 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 EXO1Q9UQ84 846 aaKnown RBP17.85■□□□□ 0.45
SUDS3-204ENST00000543473 OR2F2O95006 317 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 CBR1P16152 277 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 CX3CR1P49238 355 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 CAMK2DQ13557 499 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 OR2F1Q13607 317 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 MRPL58Q14197 206 aaKnown RBP17.85■□□□□ 0.45
SUDS3-204ENST00000543473 OR5M10Q6IEU7 315 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 OR10K2Q6IF99 312 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 CMIPQ8IY22 773 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 C14orf79Q96F83 325 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF768Q9H5H4 540 aaKnown RBP17.85■□□□□ 0.45
SUDS3-204ENST00000543473 ADAMTSL1Q8N6G6 1762 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 ACTBL2Q562R1 376 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 SOHLH1Q5JUK2 328 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 FAM27D1Q5T7N8 215 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 PLPP7Q8NBV4 271 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 MALSU1Q96EH3 234 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 OR52A5Q9H2C5 316 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF160Q9HCG1 818 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 GPATCH2Q9NW75 528 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 VSX1Q9NZR4 365 aaPredicted RBP17.85■□□□□ 0.45
SUDS3-204ENST00000543473 NTNG1Q9Y2I2 539 aa17.85■□□□□ 0.45
SUDS3-204ENST00000543473 TMEM200CA6NKL6 621 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ZDHHC11BP0C7U3 371 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 APEHP13798 732 aaKnown RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ADAM5Q6NVV9 412 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 FIP1L1Q6UN15 594 aaKnown RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 AUNIPQ9H7T9 357 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 CYSLTR2Q9NS75 346 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 FTSJ1Q9UET6 329 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 A0A0J9YY10 115 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 GABRR1P24046 479 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 IFITM3Q01628 133 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 SENP5Q96HI0 755 aaPredicted RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 C12orf57Q99622 126 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ZNF217O75362 1048 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 STK17BO94768 372 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 CD14P08571 375 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 FGF9P31371 208 aaPredicted RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 EPHA5P54756 1037 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ACSM1Q08AH1 577 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 KDM8Q8N371 416 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 MIB2Q96AX9 1013 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 LYSMD1Q96S90 227 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ULBP3Q9BZM4 244 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ABI3Q9P2A4 366 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 CA5BQ9Y2D0 317 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 GPR55Q9Y2T6 319 aaPredicted RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 CIB4A0PJX0 185 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 RAB19A4D1S5 217 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 CXCL10P02778 98 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 KLK3P07288 261 aaPredicted RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ACSM4P0C7M7 580 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 THBS2P35442 1172 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 MECP2P51608 486 aaKnown RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 TAS2R46P59540 309 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 SSX2Q16385 188 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 MEP1BQ16820 701 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 LIPNQ5VXI9 398 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 PAPD4Q6PIY7 484 aaKnown RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 FRZBQ92765 325 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 ISG20L2Q9H9L3 353 aaKnown RBP17.84■□□□□ 0.45
SUDS3-204ENST00000543473 WIF1Q9Y5W5 379 aa17.84■□□□□ 0.45
SUDS3-204ENST00000543473 TRBV5-4A0A0C4DH59 114 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 SNRPGP15A8MWD9 76 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 TMPRSS11DO60235 418 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 GLCEO94923 617 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 KIAA0040Q15053 153 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 OR7A5Q15622 319 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 SLC35D3Q5M8T2 416 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 TMEM164Q5U3C3 297 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 USP53Q70EK8 1073 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 RHOUQ7L0Q8 258 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 CMTM1Q8IZ96 169 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 RASD2Q96D21 266 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 POMT2Q9UKY4 750 aa17.83■□□□□ 0.45
SUDS3-204ENST00000543473 LAMTOR5O43504 91 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms