RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 EIF3MQ7L2H7 374 aaKnown RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 TRPM8Q7Z2W7 1104 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 HMGN2P46Q86SG4 172 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF573Q86YE8 665 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 P3H2Q8IVL5 708 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 SLC30A8Q8IWU4 369 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 SLC15A3Q8IY34 581 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 TMEM251Q8N6I4 163 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 C11orf65Q8NCR3 313 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 OR52P1PQ8NH57 321 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 B4GALNT2Q8NHY0 566 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 BBS10Q8TAM1 723 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 FAM110DQ8TAY7 271 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 RNF138Q8WVD3 245 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 OIT3Q8WWZ8 545 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ZBTB8AQ96BR9 441 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 GPR137Q96N19 417 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF607Q96SK3 696 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 RTN4RQ9BZR6 473 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 SLC38A1Q9H2H9 487 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 DSN1Q9H410 356 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 TMEM38AQ9H6F2 299 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ARMC7Q9H6L4 198 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 ZNF703Q9H7S9 590 aaPredicted RBP4.59□□□□□ -1.67
CLIP1-217ENST00000543205 DLL4Q9NR61 685 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 NDE1Q9NXR1 346 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 QPCTLQ9NXS2 382 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 MED11Q9P086 117 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 SEC14L3Q9UDX4 400 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 CHRNA9Q9UGM1 479 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 PLEKHA6Q9Y2H5 1048 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 NTNG1Q9Y2I2 539 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 C15orf41Q9Y2V0 281 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 IFT52Q9Y366 437 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 CNTRLQ7Z7A1 2325 aa4.59□□□□□ -1.67
CLIP1-217ENST00000543205 A0A1W2PRX2 142 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 NPIPB5A8MRT5 1133 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 C17orf100A8MU93 164 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF264O43296 627 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 EIF4E2O60573 245 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SCGB2A1O75556 95 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SERPINB7O75635 380 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CYP7B1O75881 506 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 AGFG2O95081 481 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 NUDT14O95848 222 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TSPAN15O95858 294 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 IL18BPO95998 194 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CSTAP01040 98 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PLA2G1BP04054 148 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ANXA8P13928 327 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 AREGP15514 252 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CALB2P22676 271 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PTBP1P26599 531 aaKnown RBP eCLIP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 DPP4P27487 766 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SRD5A2P31213 254 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PCGF2P35227 344 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CCR4P51679 360 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SLC7A2P52569 658 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 DSCR4P56555 118 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PSME3P61289 254 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CBX1P83916 185 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 RBPJQ06330 500 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SCGB2A2Q13296 93 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 FGFBP1Q14512 234 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 GANABQ14697 944 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZMYND11Q15326 602 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 MAPK11Q15759 364 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CD226Q15762 336 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 MAPK14Q16539 360 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 LIN52Q52LA3 116 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 IFI44LQ53G44 452 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF311Q5JNZ3 666 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CXorf66Q5JRM2 361 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 FNDC7Q5VTL7 733 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 AP1ARQ63HQ0 302 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ERICH5Q6P6B1 374 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM182Q6ZP80 229 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 NET1Q7Z628 596 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 IFNEQ86WN2 208 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PTOV1Q86YD1 416 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SIAH3Q8IW03 269 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 GHDCQ8N2G8 530 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 C10orf111Q8N326 155 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 OR2T12Q8NG77 320 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 OR2M3Q8NG83 312 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 OR8J1Q8NGP2 316 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 OR14L1PQ8NHC6 308 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 NTNG2Q96CW9 530 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZG16BQ96DA0 208 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 NRBF2Q96F24 287 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SH3YL1Q96HL8 342 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 MRI1Q9BV20 369 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TPPP3Q9BW30 176 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 EGLN1Q9GZT9 426 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZDHHC11Q9H8X9 412 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 BCL2L10Q9HD36 194 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SPAG4Q9NPE6 437 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CMTM6Q9NX76 183 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ADA2Q9NZK5 511 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 KCNE5Q9UJ90 142 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms