RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 NAT6Q93015 286 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.11□□□□□ -0.47
TNC-212ENST00000542877 ACER3Q9NUN7 267 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 EMC9Q9Y3B6 208 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 TGM4P49221 684 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 C17orf67Q0P5P2 114 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MEP1BQ16820 701 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 TMEM52BQ4KMG9 183 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MANEAQ5SRI9 462 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 FAM26EQ8N5C1 309 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 PCNPQ8WW12 178 aaKnown RBP12.11□□□□□ -0.47
TNC-212ENST00000542877 HHIPQ96QV1 700 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 STACQ99469 402 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MYOTQ9UBF9 498 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 BOKQ9UMX3 212 aaPredicted RBP12.11□□□□□ -0.47
TNC-212ENST00000542877 RGPD2P0DJD1 1756 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 PLSCR5A0PG75 271 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 AGAP14A8MT82 685 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 SOCS7O14512 581 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 BET1O15155 118 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 CLDN17P56750 224 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 HSD17B7P56937 341 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 SOHLH1Q5JUK2 328 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 FAM26DQ5JW98 314 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MED25Q71SY5 747 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 SGPP1Q9BX95 441 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 CD207Q9UJ71 328 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 SMLR1H3BR10 107 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 CBX7O95931 251 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 LGI1O95970 557 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
TNC-212ENST00000542877 DEFA6Q01524 100 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 EEF1A2Q05639 463 aaKnown RBP12.11□□□□□ -0.47
TNC-212ENST00000542877 SCGB2A2Q13296 93 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 ZNF266Q14584 549 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 SLC36A2Q495M3 483 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 LRRC18Q8N456 261 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MARC2Q969Z3 335 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 UHRF2Q96PU4 802 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 MMACHCQ9Y4U1 282 aa12.11□□□□□ -0.47
TNC-212ENST00000542877 CCDC163A0A0D9SF12 145 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 TMX2-CTNND1H3BSU7 103 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 GABARAPH6UMI1 98 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 P2RY10O00398 339 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 ITGB8P26012 769 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 CTU2Q2VPK5 515 aaKnown RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 SAXO2Q658L1 398 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 TMEM200AQ86VY9 491 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 OR51B6Q9H340 312 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 DOT1LQ8TEK3 1739 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 PRKRAO75569 313 aaKnown RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 CALCBP10092 127 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 DPP4P27487 766 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 THBS3P49746 956 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 IHHQ14623 411 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 GLYATL3Q5SZD4 288 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 FBXO46Q6PJ61 603 aaPredicted RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 S100A7AQ86SG5 101 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 ZNF511Q8NB15 262 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 OR52A5Q9H2C5 316 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 OBP2BQ9NPH6 170 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 ICMTO60725 284 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 CTNSO60931 367 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 TRHRP34981 398 aaPredicted RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 ARG2P78540 354 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 MRPS34P82930 218 aaKnown RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 CCNL2Q96S94 520 aaPredicted RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 MAP3K3Q99759 626 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 SEC22CQ9BRL7 303 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 DUSP21Q9H596 190 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 NTN4Q9HB63 628 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 NDUFB11Q9NX14 153 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 NUP98P52948 1817 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 M0QYG6 137 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 PLPP1O14494 284 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 BCL6P41182 706 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 TAGLNQ01995 201 aaKnown RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 ZNF808Q8N4W9 903 aaPredicted RBP12.1□□□□□ -0.47
TNC-212ENST00000542877 CLEC1AQ8NC01 280 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 PDXPQ96GD0 296 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 CXCL16Q9H2A7 254 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 SMCO4Q9NRQ5 59 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 CRYBG1Q9Y4K1 1723 aa12.1□□□□□ -0.47
TNC-212ENST00000542877 TMEM221A6NGB7 291 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 CPEP16870 476 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 BIDP55957 195 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 IAH1Q2TAA2 248 aaPredicted RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 FAM78AQ5JUQ0 283 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 CST9LP1Q5W188 147 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SLC16A11Q8NCK7 471 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 TOX2Q96NM4 488 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 TEAD3Q99594 435 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 HCSTQ9UBK5 93 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms