RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	GTF2F2	P13984	249 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	PGD	P52209	483 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	GUCA2A	Q02747	115 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF141	Q15928	474 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	ISX	Q2M1V0	245 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	TFAP2E	Q6VUC0	442 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF676	Q8N7Q3	588 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF454	Q8N9F8	522 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	OR1S1	Q8NH92	325 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	PMEPA1	Q969W9	287 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	TAS2R8	Q9NYW2	309 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	STEAP1	Q9UHE8	339 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	FBXL2	Q9UKC9	423 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	DTX4	Q9Y2E6	619 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	TVP23A	A6NH52	213 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838		H0Y8X5	98 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	RDH16	O75452	317 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	S1PR1	P21453	382 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	GRK6	P43250	576 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	LSS	P48449	732 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	ADPRH	P54922	357 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	ENPP2	Q13822	863 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	GPR18	Q14330	331 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	TSSK4	Q6SA08	328 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	CDH26	Q8IXH8	852 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	ESX1	Q8N693	406 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	RCBTB1	Q8NDN9	531 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	OR51D1	Q8NGF3	324 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	OR51S1	Q8NGJ8	323 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	OR10AC1	Q8NH08	325 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	C3orf49	Q96BT1	292 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	SPACA7	Q96KW9	195 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	LRIT1	Q9P2V4	623 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	CDV3	Q9UKY7	258 aa	Known RBP	11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	RWDD3	Q9Y3V2	267 aa		11.77	□□□□□ -0.53
DDX11-223	ENST00000542838	EFCAB7	A8K855	629 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	HRK	O00198	91 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	SPDEF	O95238	335 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	RASGRP1	O95267	797 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	IFI6	P09912	130 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	EFNB2	P52799	333 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	RAB38	P57729	211 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	RPS4X	P62701	263 aa	Known RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	SRSF5	Q13243	272 aa	Known RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	ZMYND11	Q15326	602 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF660	Q6AZW8	331 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	KRT77	Q7Z794	578 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	CSNK1A1L	Q8N752	337 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	TMEM106A	Q96A25	262 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	COMMD4	Q9H0A8	199 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	EXOSC3	Q9NQT5	275 aa	Known RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	GPR160	Q9UJ42	338 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	GGT3P	A6NGU5	568 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	AKAIN1	P0CW23	69 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	CTXN1	P60606	82 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	SORD	Q00796	357 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	UBXN2B	Q14CS0	331 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	C4orf46	Q504U0	113 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	RNF44	Q7L0R7	432 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	LSM14A	Q8ND56	463 aa	Known RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	OR52H1	Q8NGJ2	320 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	OR5M9	Q8NGP3	310 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	OR6N1	Q8NGY5	312 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF417	Q8TAU3	575 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	FBXW5	Q969U6	566 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	RBM18	Q96H35	190 aa	Known RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	GPX7	Q96SL4	187 aa	Predicted RBP	11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	ULBP3	Q9BZM4	244 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	MFF	Q9GZY8	342 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	LDAH	Q9H6V9	325 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	EXO5	Q9H790	373 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	LAMP5	Q9UJQ1	280 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	C2orf16	Q68DN1	1984 aa		11.76	□□□□□ -0.53
DDX11-223	ENST00000542838	TRAV18	A0A075B6X5	111 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	SDC3	O75056	442 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	CTAG2	O75638	210 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	TPPP	O94811	219 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	ABHD16A	O95870	558 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	IGF2	P01344	180 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	POU2F2	P09086	479 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	FCAR	P24071	287 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	ANKRD16	Q6P6B7	361 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	NPSR1	Q6W5P4	371 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	ZNF595	Q8IYB9	648 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	OR51A4	Q8NGJ6	313 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	OR6N2	Q8NGY6	317 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	OR8S1	Q8NH09	359 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	OR4C3	Q8NH37	302 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	BAHD1	Q8TBE0	780 aa	Predicted RBP	11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	RSC1A1	Q92681	617 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	CHST6	Q9GZX3	395 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	MOK	Q9UQ07	419 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	SERINC4	A6NH21	518 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	OR4C45	A6NMZ5	311 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838		D6RAR5	112 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838		H7C1C5	153 aa		11.75	□□□□□ -0.53
DDX11-223	ENST00000542838	DCTN6	O00399	190 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms