RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 IL18R1Q13478 541 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 DPYSL3Q14195 570 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 STK38Q15208 465 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 DUSP7Q16829 419 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ISXQ2M1V0 245 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 HNRNPA1L2Q32P51 320 aaKnown RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 Q3ZCU0 254 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 LIN9Q5TKA1 542 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 MEDAGQ5VYS4 303 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 SLC22A10Q63ZE4 541 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 NIPA1Q7RTP0 329 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 METTL4Q8N3J2 472 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 MMGT1Q8N4V1 131 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CSGALNACT2Q8N6G5 542 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 OR52H1Q8NGJ2 320 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 LILRB4Q8NHJ6 448 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 RHEBL1Q8TAI7 183 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 C11orf45Q8TAV5 145 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 MARCH1Q8TCQ1 289 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CDKL2Q92772 493 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 KIFAP3Q92845 792 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 TOMM40LQ969M1 308 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 TMEM80Q96HE8 168 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 GMPPAQ96IJ6 420 aaPredicted RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ATP6V1G3Q96LB4 118 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ZIM3Q96PE6 472 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 UQCC2Q9BRT2 126 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 LLPHQ9BRT6 129 aaKnown RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ZNF670Q9BS34 389 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 VCXQ9H320 206 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PPDPFQ9H3Y8 114 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CCNB1IP1Q9NPC3 277 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 EXOSC3Q9NQT5 275 aaKnown RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 INIPQ9NRY2 104 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 ABCC13Q9NSE7 274 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 RMND1Q9NWS8 449 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 PHF11Q9UIL8 331 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 COPS3Q9UNS2 423 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 LRRC42Q9Y546 428 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CPQQ9Y646 472 aa3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 DICER1Q9UPY3 1922 aaKnown RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 MYO5AQ9Y4I1 1855 aaKnown RBP3.22□□□□□ -1.89
SFSWAP-211ENST00000542813 CNTNAP2Q9UHC6 1331 aa3.21□□□□□ -1.89
SFSWAP-211ENST00000542813 MYH8P13535 1937 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 SCN11AQ9UI33 1791 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 TCRBV9S1A1TA0A576 114 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 MEIOCA2RUB1 952 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 SMCO2A6NFE2 343 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 TUBAL3A6NHL2 446 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 VSTM2BA6NLU5 285 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 E7ESA3 106 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PDHXO00330 501 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 BCKDKO14874 412 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 LATO43561 262 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 STAMBPO95630 424 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 SNAI1O95863 264 aaPredicted RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 BMP15O95972 392 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 FAM107AO95990 144 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 IGKV2-30P06310 120 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 CD55P08174 381 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 UBTFL1P0CB47 393 aaPredicted RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 GNB3P16520 340 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 COX5AP20674 150 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 BCL3P20749 454 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PRDX3P30048 256 aaKnown RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 IFNA8P32881 189 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 SPRP35270 261 aaPredicted RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 TIMP3P35625 211 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 LEPP41159 167 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 RFX3P48380 749 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 RIDAP52758 137 aaKnown RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 NANOS2P60321 138 aaKnown RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 RAB10P61026 200 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 B2MP61769 119 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 VLDLRP98155 873 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 PUDPQ08623 228 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 SCRN3Q0VDG4 424 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ITGB3BPQ13352 177 aaPredicted RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ITIH4Q14624 930 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF146Q15072 292 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF672Q499Z4 452 aaPredicted RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 C14orf28Q4W4Y0 310 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 EIPR1Q53HC9 387 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ADAMTSL4-AS1Q5T5F5 129 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 RESP18Q5W5W9 173 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 KCTD16Q68DU8 428 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 ZNF57Q68EA5 555 aaPredicted RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 CD302Q8IX05 232 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 IQCKQ8N0W5 287 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 DEFB123Q8N688 67 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 TRIML2Q8N7C3 387 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 BEST4Q8NFU0 473 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 OR2T6Q8NHC8 308 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 GPR151Q8TDV0 419 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 AGAP11Q8TF27 550 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 TCTEX1D2Q8WW35 142 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 TMIGD2Q96BF3 282 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 CERS2Q96G23 380 aa3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 CELF6Q96J87 481 aaKnown RBP3.21□□□□□ -1.9
SFSWAP-211ENST00000542813 LYZL4Q96KX0 146 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms