RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SPA17Q15506 151 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 PSMD5Q16401 504 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 C3AR1Q16581 482 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 ZBED5Q49AG3 693 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 FAM106AQ4KMX7 169 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 COQ5Q5HYK3 327 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 C6orf52Q5T4I8 152 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 UBE2UQ5VVX9 321 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 RSBN1Q5VWQ0 802 aaPredicted RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 LIPKQ5VXJ0 399 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 SEL1L3Q68CR1 1132 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 TIGD3Q6B0B8 471 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 PRR5LQ6MZQ0 368 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 FRRS1Q6ZNA5 592 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 Q6ZVQ6 151 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 PGAP1Q75T13 922 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 GOLGA7Q7Z5G4 137 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 GTSCR1Q86UQ5 136 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 VASH2Q86V25 355 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 TMEM17Q86X19 198 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 CATSPERDQ86XM0 798 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 CACUL1Q86Y37 369 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 ZNF679Q8IYX0 411 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 GCNT2Q8N0V5 402 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 METTL4Q8N3J2 472 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 CADM2Q8N3J6 435 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 SVOPLQ8N434 492 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 BHLHE23Q8NDY6 225 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 OR10A7Q8NGE5 316 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 NANPQ8TBE9 248 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 RDH11Q8TC12 318 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 TMEM37Q8WXS4 190 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 C22orf15Q8WYQ4 148 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 GTF2H4Q92759 462 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 EXOSC8Q96B26 276 aaKnown RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 DCPSQ96C86 337 aaKnown RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 CAPZA3Q96KX2 299 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 RNF145Q96MT1 663 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 AGAP4Q96P64 663 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 ERGIC2Q96RQ1 377 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 ZBTB18Q99592 522 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 ZNF2Q9BSG1 426 aaPredicted RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 COPS4Q9BT78 406 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 DCTN5Q9BTE1 182 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 NDUFAF3Q9BU61 184 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 TMEM109Q9BVC6 243 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 MRPL13Q9BYD1 178 aaKnown RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 TOLLIPQ9H0E2 274 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 NEUROG2Q9H2A3 272 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 LRRN3Q9H3W5 708 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 FAM124BQ9H5Z6 455 aaPredicted RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 KAT8Q9H7Z6 458 aaKnown RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 NIPAL2Q9H841 368 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.71□□□□□ -1.98
USP28-210ENST00000542033 TREX1Q9NSU2 369 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 MED17Q9NVC6 651 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 MED9Q9NWA0 146 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 BABAM2Q9NXR7 383 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 LHX3Q9UBR4 397 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 PEF1Q9UBV8 284 aaKnown RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 ENPP5Q9UJA9 477 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 GUCA1BQ9UMX6 200 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 PSMD13Q9UNM6 376 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 MOB4Q9Y3A3 225 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 ZNFX1Q9P2E3 1918 aaKnown RBP2.71□□□□□ -1.98
USP28-210ENST00000542033 KIAA0586Q9BVV6 1533 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 GRIN2BQ13224 1484 aa2.71□□□□□ -1.98
USP28-210ENST00000542033 PLCH2O75038 1416 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 A0A1B0GV90 55 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 OR2AT4A6NND4 320 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZNF716A6NP11 495 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 SRRM4A7MD48 611 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 HACD1B0YJ81 288 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 LMO7DNF2Z398 122 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 G3V2T6 193 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 H3BSA7 217 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PSMD12O00232 456 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 KPNA3O00505 521 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 GPAA1O43292 621 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 KIAA0513O60268 411 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PLIN3O60664 434 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CTNSO60931 367 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZNF780AO75290 641 aaPredicted RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 ENTPD5O75356 428 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 SPAG7O75391 227 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MED6O75586 246 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CEACAM4O75871 244 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CLPXO76031 633 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 TSPAN12O95859 305 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 PPBPP02775 128 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 UGT2B4P06133 528 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 CA3P07451 260 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ACSM4P0C7M7 580 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZNF735P0CB33 412 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 ZNF30P17039 623 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 OGNP20774 298 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 PAICSP22234 425 aaKnown RBP2.7□□□□□ -1.98
USP28-210ENST00000542033 HSD11B1P28845 292 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 MATKP42679 507 aa2.7□□□□□ -1.98
USP28-210ENST00000542033 RPL35P42766 123 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms