RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 ASAH2BP0C7U1 165 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 DANCRP0C864 163 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 FUT4P22083 530 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 GTF2E2P29084 291 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 AGTR1P30556 359 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 HMGA2P52926 109 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 NUDT6P53370 316 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 UGT2B15P54855 530 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 SLC17A1Q14916 467 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ADAM5Q6NVV9 412 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 IL17RELQ6ZVW7 336 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 MBOAT2Q6ZWT7 520 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 H1FNTQ75WM6 255 aaPredicted RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 SPATA24Q86W54 205 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 CCDC103Q8IW40 242 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM99Q8N816 258 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 PAPD5Q8NDF8 572 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 SLC7A13Q8TCU3 470 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 CANT1Q8WVQ1 401 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 UTP4Q969X6 686 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 S100PBPQ96BU1 408 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 SLC25A36Q96CQ1 311 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 DNAJA3Q96EY1 480 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 MOGAT1Q96PD6 335 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 FUZQ9BT04 418 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ASPNQ9BXN1 380 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ESRP2Q9H6T0 727 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 YY1AP1Q9H869 796 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 BARX1Q9HBU1 254 aaPredicted RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 NGBQ9NPG2 151 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 NANSQ9NR45 359 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 MRPL39Q9NYK5 338 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 EMC3Q9P0I2 261 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 RHCGQ9UBD6 479 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF229Q9UJW7 825 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 RASD1Q9Y272 281 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 GPR52Q9Y2T5 361 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 MED31Q9Y3C7 131 aa7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ANK3Q12955 4377 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 SONP18583 2426 aaKnown RBP7.66□□□□□ -1.18
CLSTN3-212ENST00000541770 ATRQ13535 2644 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 M0R082 166 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 KPNA4O00629 521 aaPredicted RBP7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 WIPF1O43516 503 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 RAMP1O60894 148 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 CIB2O75838 187 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 OR7A10O76100 309 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 DIRAS1O95057 198 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 GADD45GO95257 159 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 CH25HO95992 272 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF16P17020 682 aaPredicted RBP7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 IL32P24001 234 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 GRPRP30550 384 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 RRM2P31350 389 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 LIMS1P48059 325 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 SPIBQ01892 262 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 PRKCDQ05655 676 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 RUNX1T1Q06455 604 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 ZP4Q12836 540 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 GK3PQ14409 553 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM249Q2WGJ8 235 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF672Q499Z4 452 aaPredicted RBP7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM201Q5SNT2 666 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 NCMAPQ5T1S8 102 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 C1orf146Q5VVC0 180 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM225Q6GV28 225 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 CLEC2AQ6UVW9 174 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF730Q6ZMV8 503 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 RRM2BQ7LG56 351 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 SLC46A3Q7Z3Q1 461 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 LSRQ86X29 649 aaPredicted RBP7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 TUSC5Q8IXB3 177 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 CDK20Q8IZL9 346 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 ARIH2OSQ8N7S6 290 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 STEAP2Q8NFT2 490 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 OR9K2Q8NGE7 335 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 OR5J2Q8NH18 312 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 PFN4Q8NHR9 129 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF417Q8TAU3 575 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 TMEM45BQ96B21 275 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 BPIFA2Q96DR5 249 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 SGTBQ96EQ0 304 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 DUS3LQ96G46 650 aaKnown RBP7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 OXGR1Q96P68 337 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 RAB3IPQ96QF0 476 aaPredicted RBP7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 TNFRSF13CQ96RJ3 184 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 ZNF587Q96SQ5 575 aaPredicted RBP7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 CHID1Q9BWS9 393 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 CHODLQ9H9P2 273 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 MXRA5Q9NR99 2828 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 C20orf141Q9NUB4 165 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 LPAR3Q9UBY5 353 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 FLVCR1Q9Y5Y0 555 aa7.65□□□□□ -1.18
CLSTN3-212ENST00000541770 TRBV4-1A0A0J9YWV2 114 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 SH3PXD2BA1X283 911 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 ANKRD65E5RJM6 399 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 LRRN3E7EW58 273 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 MS4A18H0YCH9 400 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 PLPP3O14495 311 aa7.64□□□□□ -1.19
CLSTN3-212ENST00000541770 HIST1H2ABP04908 130 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms