RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZNF503-AS2A6NEH8 195 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 PGRMC1O00264 195 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 SURF4O15260 269 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 FBXO24O75426 580 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 CLIC3O95833 236 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 IGHV1-46P01743 117 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 C2P06681 752 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 ENO1P06733 434 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 RPS17P08708 135 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 FBP1P09467 338 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 CXCR1P25024 350 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 ETV4P43268 484 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 IDH2P48735 452 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 MMP16P51512 607 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 CLDN17P56750 224 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 PCBP3P57721 371 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 SEC61A1P61619 476 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 PAX2Q02962 417 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 NAB1Q13506 487 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 C1DQ13901 141 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 GPR68Q15743 365 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 TBC1D28Q2M2D7 210 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 ZNF718Q3SXZ3 478 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 SPDYE7PQ495Y7 208 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 ATP6AP1LQ52LC2 224 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 DPPA2Q7Z7J5 298 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 ZER1Q7Z7L7 766 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 KLHDC1Q8N7A1 406 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 PAPD5Q8NDF8 572 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 SLC30A7Q8NEW0 376 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 OR8B3Q8NGG8 313 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 FAM120BQ96EK7 910 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 PBKQ96KB5 322 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 OR8B2Q96RD0 313 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 PCGF1Q9BSM1 259 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 DESI2Q9BSY9 194 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 RNF121Q9H920 327 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 RAB18Q9NP72 206 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 NOP53Q9NZM5 478 aaKnown RBP7.89□□□□□ -1.15
YBX3-211ENST00000541351 RNF14Q9UBS8 474 aa7.89□□□□□ -1.15
YBX3-211ENST00000541351 A0A096LPI6 279 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 TMEM72A0PK05 275 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 SERTM1A2A2V5 107 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 FAM159BA6NKW6 160 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 CEACAM18A8MTB9 384 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 TBX19O60806 448 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 JTBO76095 146 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 TOX4O94842 621 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 SNAP29O95721 258 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 CD55P08174 381 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 GSTA2P09210 222 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 WNT2P09544 360 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 CHN1P15882 459 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 MSX2P35548 267 aaPredicted RBP7.88□□□□□ -1.15
YBX3-211ENST00000541351 FRKP42685 505 aaPredicted RBP7.88□□□□□ -1.15
YBX3-211ENST00000541351 UCP2P55851 309 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 TNFAIP6P98066 277 aaPredicted RBP7.88□□□□□ -1.15
YBX3-211ENST00000541351 PLP2Q04941 152 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 GSTA3Q16772 222 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 METTL11BQ5VVY1 283 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 CD276Q5ZPR3 534 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 SLC35E4Q6ICL7 350 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 GPRIN3Q6ZVF9 776 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 ZNF627Q7L945 461 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 ZNF283Q8N7M2 679 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 FAM71CQ8NEG0 241 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 VPS37AQ8NEZ2 397 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 ZNF483Q8TF39 744 aaPredicted RBP7.88□□□□□ -1.15
YBX3-211ENST00000541351 NPRL2Q8WTW4 380 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 ITPKCQ96DU7 683 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 RBMXL1Q96E39 390 aaKnown RBP7.88□□□□□ -1.15
YBX3-211ENST00000541351 NEIL1Q96FI4 390 aaPredicted RBP7.88□□□□□ -1.15
YBX3-211ENST00000541351 TSPAN32Q96QS1 320 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 ZNF382Q96SR6 550 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 SDF2Q99470 211 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 MMP28Q9H239 520 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 RANBP3Q9H6Z4 567 aaPredicted RBP7.88□□□□□ -1.15
YBX3-211ENST00000541351 EXD2Q9NVH0 621 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 CLN8Q9UBY8 286 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 OSGIN1Q9UJX0 560 aa7.88□□□□□ -1.15
YBX3-211ENST00000541351 IGHV1-69DA0A0B4J2H0 117 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 TCRBV9S1A1TA0A576 114 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 E7ESA3 106 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 PHYHO14832 338 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 PIAS1O75925 651 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 FARS2O95363 451 aaKnown RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 AGR2O95994 175 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 IGHV1-69P01742 117 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 PF4V1P10720 104 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 TACR3P29371 465 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 PGM1P36871 562 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 KIR2DS4P43632 304 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 CCT3P49368 545 aaKnown RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 ANXA11P50995 505 aaKnown RBP7.87□□□□□ -1.15
YBX3-211ENST00000541351 EFNB2P52799 333 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 CDH13P55290 713 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 GLO1Q04760 184 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 CLCQ05315 142 aa7.87□□□□□ -1.15
YBX3-211ENST00000541351 GNA13Q14344 377 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms