RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 OR13C2Q8NGS9 318 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 OR2G2Q8NGZ5 317 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 MAL2Q969L2 176 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TAPBPLQ9BX59 468 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SGK2Q9HBY8 427 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SIRT7Q9NRC8 400 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ADAM29Q9UKF5 820 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 PCDHGA2Q9Y5H1 932 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 DMRT1Q9Y5R6 373 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TRBV23OR9-2A0A075B6M9 112 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 RNASET2O00584 256 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 PPM1DO15297 605 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 CYB5BO43169 146 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 METTL15P1P0C7V9 234 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TAS2R30P59541 319 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TRA2BP62995 288 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ARFRP1Q13795 201 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ASTLQ6HA08 431 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 PARS2Q7L3T8 475 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 PRICKLE2Q7Z3G6 844 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SLC30A7Q8NEW0 376 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 OR52N2Q8NGI0 321 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SGPP1Q9BX95 441 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 C20orf85Q9H1P6 137 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 PLEKHA2Q9HB19 425 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 WNT6Q9Y6F9 365 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 HIDE1A8MVS5 230 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 DCTN6O00399 190 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 KLF8O95600 359 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 APODP05090 189 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 RPLP1P05386 114 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ACP2P11117 423 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ATP5A1P25705 553 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 BMP8BP34820 402 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 PTGFRP43088 359 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SULT1A2P50226 295 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ACY1Q03154 408 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 HSPB3Q12988 150 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 MFSD13AQ14CX5 517 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TRIM61Q5EBN2 209 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 C1orf185Q5T7R7 199 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 DBX2Q6ZNG2 339 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 Q6ZVL8 140 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 BMP8AQ7Z5Y6 402 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF679Q8IYX0 411 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 FAM86B1Q8N7N1 296 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM145Q8NBT3 493 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 OR4C15Q8NGM1 316 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 DYRK2Q92630 601 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 DNASE1L2Q92874 299 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SLC25A46Q96AG3 418 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF707Q96C28 371 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF583Q96ND8 569 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TM7SF3Q9NS93 570 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 BABAM2Q9NXR7 383 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 THAP10Q9P2Z0 257 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF107Q9UII5 783 aaPredicted RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 CCL26Q9Y258 94 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 LSM5Q9Y4Y9 91 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 HEBP2Q9Y5Z4 205 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 RRP8O43159 456 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ADAM11O75078 769 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 ADRB3P13945 408 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TIA1P31483 386 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 CX3CR1P49238 355 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 UBE2NLQ5JXB2 153 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 TMEM220Q6QAJ8 160 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 FAM46AQ96IP4 442 aaKnown RBP5.6□□□□□ -1.51
PTPRD-214ENST00000540109 PTGES2Q9H7Z7 377 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SPACA1Q9HBV2 294 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 SUSD2Q9UGT4 822 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 KCNK7Q9Y2U2 307 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 MED31Q9Y3C7 131 aa5.6□□□□□ -1.51
PTPRD-214ENST00000540109 LPLP06858 475 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 C1GALT1C1LP0DN25 315 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 NAGAP17050 411 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 GABRB1P18505 474 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 SDC1P18827 310 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 GCH1P30793 250 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 PFN3P60673 137 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 IFITM3Q01628 133 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 PNRC1Q12796 327 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-214ENST00000540109 ILKQ13418 452 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 HLA-DQA1Q5Y7H0 255 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 GRASPQ7Z6J2 395 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF784Q8NCA9 323 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-214ENST00000540109 CREB3L4Q8TEY5 395 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 BADQ92934 168 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 GNPNAT1Q96EK6 184 aaPredicted RBP5.59□□□□□ -1.51
PTPRD-214ENST00000540109 ZNF354BQ96LW1 612 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 TGM7Q96PF1 710 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 GABARAPL3Q9BY60 117 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 CCDC163A0A0D9SF12 145 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 MFSD2BA6NFX1 497 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 UMAD1C9J7I0 102 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 H7BY64 318 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 LDLRAD4O15165 306 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 GPX2P18283 190 aa5.59□□□□□ -1.51
PTPRD-214ENST00000540109 FGF9P31371 208 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms