RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SFTPDP35247 375 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 DBPQ10586 325 aaPredicted RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 MLC1Q15049 377 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 DUSP5Q16690 384 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 SLC22A6Q4U2R8 563 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 NT5CQ8TCD5 201 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 Q96M85 177 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ELF4Q99607 663 aaPredicted RBP9.17□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF649Q9BS31 505 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 SLC5A7Q9GZV3 580 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 HRH4Q9H3N8 390 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 MED17Q9NVC6 651 aa9.17□□□□□ -0.94
TRAF1-202ENST00000540010 CHRM4P08173 479 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 OR2T7P0C7T2 308 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 PET100P0DJ07 73 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 PCBP3P57721 371 aaKnown RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CSNK2A1P68400 391 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TLE3Q04726 772 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 RUNX2Q13950 521 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 OTPQ5XKR4 325 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 IDO2Q6ZQW0 420 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 NDUFAF7Q7L592 441 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 GLB1L2Q8IW92 636 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 DNAAF1Q8NEP3 725 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CSNK2A3Q8NEV1 391 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 OR2T27Q8NH04 317 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 OR52N1Q8NH53 320 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TANKQ92844 425 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TBC1D20Q96BZ9 403 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM43Q9BTV4 400 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ASB6Q9NWX5 421 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 VSX1Q9NZR4 365 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 DAPP1Q9UN19 280 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 FLVCR2Q9UPI3 526 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 RHBDD3Q9Y3P4 386 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 LSM5Q9Y4Y9 91 aaKnown RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 SZT2Q5T011 3432 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 SLC33A1O00400 549 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 FBXO24O75426 580 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CRTAPO75718 401 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 SEMG1P04279 462 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 HOXB5P09067 269 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM225BP0DP42 221 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CLUP10909 449 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 PIPP12273 146 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF35P13682 527 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ST6GAL1P15907 406 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TUBG1P23258 451 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 FXYD4P59646 89 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 EEF1A2Q05639 463 aaKnown RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 COX15Q7KZN9 410 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CCDC190Q86UF4 302 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 SLC35F3Q8IY50 421 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 AVL9Q8NBF6 648 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 S100PBPQ96BU1 408 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF764Q96H86 408 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 SARGQ9BW04 601 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 BTBD2Q9BX70 525 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 NRIP3Q9NQ35 241 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 MEPEQ9NQ76 525 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 INPP5EQ9NRR6 644 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 SLCO1B1Q9Y6L6 691 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ICE1Q9Y2F5 2266 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM265A0A087WTH1 108 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 F5H5K5 113 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 PRKNO60260 465 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 GPRIN2O60269 458 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 FADS1O60427 444 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ATP1B1P05026 303 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CFIP05156 583 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CPEP16870 476 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 NPR2P20594 1047 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 CSNK1EP49674 416 aaKnown RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 RAB5BP61020 215 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 HNRNPKP61978 463 aaKnown RBP eCLIP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 IFITM3Q01628 133 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 GLO1Q04760 184 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 DUSP2Q05923 314 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 FAM69BQ5VUD6 431 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 MFSD12Q6NUT3 480 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 LRRC69Q6ZNQ3 347 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF440Q8IYI8 595 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 TEX19Q8NA77 164 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 OR5H2Q8NGV7 314 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 OR10K1Q8NGX5 313 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ZFAND1Q8TCF1 268 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 RASD2Q96D21 266 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ZNF587Q96SQ5 575 aaPredicted RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 PLA2G12AQ9BZM1 189 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ISG20L2Q9H9L3 353 aaKnown RBP9.16□□□□□ -0.94
TRAF1-202ENST00000540010 ADAM18Q9Y3Q7 739 aa9.16□□□□□ -0.94
TRAF1-202ENST00000540010 BORCS7-ASMTA0A0B4J1R7 106 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 TMEM269A0A1B0GVZ9 245 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 VSTM2BA6NLU5 285 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 METTL12A8MUP2 240 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 SYT5O00445 386 aa9.15□□□□□ -0.94
TRAF1-202ENST00000540010 TOR1AO14656 332 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms