RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SLC16A9Q7RTY1 509 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 SCAIQ8N9R8 606 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 OR1J4Q8NGS1 313 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 NTNG2Q96CW9 530 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 THOC3Q96J01 351 aaKnown RBP20.18■□□□□ 0.82
HOMER3-204ENST00000539827 ALKBH4Q9NXW9 302 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 A3GALT2U3KPV4 340 aa20.18■□□□□ 0.82
HOMER3-204ENST00000539827 PRSS37A4D1T9 235 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 HLA-DPB1P04440 258 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 DPP4P27487 766 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 FGF9P31371 208 aaPredicted RBP20.17■□□□□ 0.82
HOMER3-204ENST00000539827 SDC2P34741 201 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 RUNX1T1Q06455 604 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 GPR50Q13585 617 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 CDONQ4KMG0 1287 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 ACER2Q5QJU3 275 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 C16orf87Q6PH81 154 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 FOXN4Q96NZ1 517 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 OR5B2Q96R09 309 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 WDR12Q9GZL7 423 aaKnown RBP20.17■□□□□ 0.82
HOMER3-204ENST00000539827 IL17BQ9UHF5 180 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 GNG8Q9UK08 70 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 KNTC1P50748 2209 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 OTOGLQ3ZCN5 2332 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 SMIM30A4D0T7 59 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 ANKRD33BA6NCL7 494 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 DVL2O14641 736 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 LIFP15018 202 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 SFTPDP35247 375 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 OR2B6P58173 313 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 TMEM91Q6ZNR0 172 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 RAB43Q86YS6 212 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 TIGD4Q8IY51 512 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 ZBTB8AQ96BR9 441 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 B9D1Q9UPM9 204 aa20.17■□□□□ 0.82
HOMER3-204ENST00000539827 PSMD9O00233 223 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 TRIM3O75382 744 aaPredicted RBP20.16■□□□□ 0.82
HOMER3-204ENST00000539827 EIF1P41567 113 aaKnown RBP20.16■□□□□ 0.82
HOMER3-204ENST00000539827 DNASE1L1P49184 302 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 CENPAP49450 140 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 RORCP51449 518 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 TAS2R43P59537 309 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 ACTA2P62736 377 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 ACTG2P63267 376 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 TMEM176BQ3YBM2 270 aaPredicted RBP20.16■□□□□ 0.82
HOMER3-204ENST00000539827 OTPQ5XKR4 325 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 BEST3Q8N1M1 668 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 SYS1Q8N2H4 156 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 FNDC8Q8TC99 324 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 PSMF1Q92530 271 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 PELI1Q96FA3 418 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 SGCZQ96LD1 299 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 ADAD1Q96M93 576 aaKnown RBP20.16■□□□□ 0.82
HOMER3-204ENST00000539827 MARCH7Q9H992 704 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 ST6GALNAC2Q9UJ37 374 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 KLHDC2Q9Y2U9 406 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 ALPK2Q86TB3 2170 aa20.16■□□□□ 0.82
HOMER3-204ENST00000539827 A0A087WZY1 265 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 A0A0G2JMM0 328 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 A0A1W2PPB8 328 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 A0A1W2PRS3 328 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 KIR3DP1A8MWS1 328 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 PRR32B1ATL7 298 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 NPIPA5E9PKD4 350 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 STMND1H3BQB6 276 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 SLC16A7O60669 478 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 RGS9O75916 674 aaPredicted RBP20.15■□□□□ 0.82
HOMER3-204ENST00000539827 F10P00742 488 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 IL1AP01583 271 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 P04436 131 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 IFNGR1P15260 489 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 PSMB10P40306 273 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 GBX2P52951 348 aaPredicted RBP20.15■□□□□ 0.82
HOMER3-204ENST00000539827 SELENBP1Q13228 472 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 WDFY1Q8IWB7 410 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 TXNDC15Q96J42 360 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 WDR76Q9H967 626 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 VSX1Q9NZR4 365 aaPredicted RBP20.15■□□□□ 0.82
HOMER3-204ENST00000539827 DKKL1Q9UK85 242 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 NPIPA1Q9UND3 350 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 SLC22A23A1A5C7 686 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 PLPP2O43688 288 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 ADH6P28332 368 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 POU3F1Q03052 451 aaPredicted RBP20.15■□□□□ 0.82
HOMER3-204ENST00000539827 HNRNPA0Q13151 305 aaKnown RBP20.15■□□□□ 0.82
HOMER3-204ENST00000539827 TIGD3Q6B0B8 471 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 SLC35D2Q76EJ3 337 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 OR6N2Q8NGY6 317 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 ASB10Q8WXI3 467 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 SNX18Q96RF0 628 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 SIAEQ9HAT2 523 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 FKBP7Q9Y680 259 aa20.15■□□□□ 0.82
HOMER3-204ENST00000539827 CTDSP2O14595 271 aa20.14■□□□□ 0.81
HOMER3-204ENST00000539827 S100A5P33763 92 aa20.14■□□□□ 0.81
HOMER3-204ENST00000539827 RPS27P42677 84 aaKnown RBP20.14■□□□□ 0.81
HOMER3-204ENST00000539827 DSCR4P56555 118 aaPredicted RBP20.14■□□□□ 0.81
HOMER3-204ENST00000539827 HSF1Q00613 529 aa20.14■□□□□ 0.81
HOMER3-204ENST00000539827 HSF2Q03933 536 aa20.14■□□□□ 0.81
HOMER3-204ENST00000539827 ETFDHQ16134 617 aa20.14■□□□□ 0.81
HOMER3-204ENST00000539827 DMKNQ6E0U4 476 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms