RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 DMRT1Q9Y5R6 373 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CHCHD2Q9Y6H1 151 aaPredicted RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 SERTM1A2A2V5 107 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 FAM187AA6NFU0 413 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 PGRMC2O15173 223 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 TCAPO15273 167 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 RGS14O43566 566 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 NPHS1O60500 1241 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 UGDHO60701 494 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 EEDO75530 441 aaKnown RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 TGM6O95932 706 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 C2P06681 752 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 IL3P08700 152 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 QDPRP09417 244 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CLUP10909 449 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 EEF1B2P24534 225 aaKnown RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 FPR3P25089 353 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CHI3L1P36222 383 aaPredicted RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 CCT3P49368 545 aaKnown RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 TAS2R60P59551 318 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 RPS23P62266 143 aaKnown RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 PLP2Q04941 152 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 INTS11Q5TA45 600 aaKnown RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 CPTPQ5TA50 214 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 TTC27Q6P3X3 843 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 ZDHHC24Q6UX98 284 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 MSANTD1Q6ZTZ1 278 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 ZNF786Q8N393 782 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 MFSD4AQ8N468 514 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 OR10J5Q8NHC4 309 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 RHOVQ96L33 236 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CDK15Q96Q40 435 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 MID1IP1Q9NPA3 183 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 IL1RAPQ9NPH3 570 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 TMEM45AQ9NWC5 275 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 EXTL2Q9UBQ6 330 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 SLC23A1Q9UHI7 598 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 C7orf72A4D263 438 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CCDC182A6NF36 153 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 DUXAA6NLW8 204 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 C5orf58C9J3I9 102 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 SLC28A1O00337 649 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CXCR1P25024 350 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 EPHA3P29320 983 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 TMEM107Q6UX40 140 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 SH2D5Q6ZV89 423 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 USP51Q70EK9 711 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 P2RY8Q86VZ1 359 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 OR8H3Q8N146 312 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 GPR137CQ8N3F9 429 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CDRT4Q8N9R6 151 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 CPEB3Q8NE35 698 aaKnown RBP6.78□□□□□ -1.32
GNE-205ENST00000539815 BPIFB6Q8NFQ5 453 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 ZBTB8AQ96BR9 441 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 MEGF10Q96KG7 1140 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 INPP5KQ9BT40 448 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 B3GNT2Q9NY97 397 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 COPZ2Q9P299 210 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 DUSP13Q9UII6 198 aa6.78□□□□□ -1.32
GNE-205ENST00000539815 LRRC3CA6NJW4 275 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 LOC110117498-PIK3R3F6TDL0 507 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 PLPP1O14494 284 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 UTS2O95399 124 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 PSMB1P20618 241 aaKnown RBP6.77□□□□□ -1.33
GNE-205ENST00000539815 PGGT1BP53609 377 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 DEFA6Q01524 100 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 HMGCS1Q01581 520 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 OCLNQ16625 522 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 GPAT3Q53EU6 434 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 ZNF544Q6NX49 715 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 GOLGA7Q7Z5G4 137 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 LYSMD2Q8IV50 215 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 PLD6Q8N2A8 252 aaKnown RBP6.77□□□□□ -1.33
GNE-205ENST00000539815 RP9Q8TA86 221 aaKnown RBP6.77□□□□□ -1.33
GNE-205ENST00000539815 RNF145Q96MT1 663 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 LINC00052Q96N35 136 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 AMDHD1Q96NU7 426 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 ACTRT3Q9BYD9 372 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 ING3Q9NXR8 418 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 ABCG2Q9UNQ0 655 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 HEATR1Q9H583 2144 aaKnown RBP6.77□□□□□ -1.33
GNE-205ENST00000539815 A0A087WXM4 84 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 METTL21EPA6NDL7 271 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 BTBD17A6NE02 478 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 ANKRD28O15084 1053 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 ATG12O94817 140 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 CSTAP01040 98 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 IL7P13232 177 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 PTPN6P29350 595 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 MAP2K4P45985 399 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 EFNA4P52798 201 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 TSPAN5P62079 268 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 TRA2BP62995 288 aaKnown RBP6.77□□□□□ -1.33
GNE-205ENST00000539815 BSPH1Q075Z2 132 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 TAB1Q15750 504 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 ZIK1Q3SY52 487 aaPredicted RBP6.77□□□□□ -1.33
GNE-205ENST00000539815 CDC73Q6P1J9 531 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 SLC48A1Q6P1K1 146 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 LETMD1Q6P1Q0 360 aa6.77□□□□□ -1.33
GNE-205ENST00000539815 AAED1Q7RTV5 226 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms