RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 FABP1P07148 127 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 MTHFD2P13995 350 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 PVRP15151 417 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 CD38P28907 300 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 PSMB3P49720 205 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 RAB38P57729 211 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 C9orf135Q5VTT2 229 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 HTR3DQ70Z44 454 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 FJX1Q86VR8 437 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 HPSE2Q8WWQ2 592 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 UCN3Q969E3 161 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 SAT2Q96F10 170 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 CD207Q9UJ71 328 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 FNDC1Q4ZHG4 1894 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 LTBP3Q9NS15 1303 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 MAGEB4O15481 346 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 SUSD5O60279 629 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 SORBS2O94875 1100 aaKnown RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 METTL15P1P0C7V9 234 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 LGALS4P56470 323 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 CLDN17P56750 224 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 EEF1A2Q05639 463 aaKnown RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 IAH1Q2TAA2 248 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 FAM122CQ6P4D5 195 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 MDGA2Q7Z553 956 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 ZNF296Q8WUU4 475 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 GHSRQ92847 366 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 LURAP1Q96LR2 239 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 SLC25A21Q9BQT8 299 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 GINS3Q9BRX5 216 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 B3GAT1Q9P2W7 334 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 ETV7Q9Y603 341 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 A0A087WZY1 265 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 TMEM221A6NGB7 291 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 STMND1H3BQB6 276 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 ARHGAP33O14559 1287 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 PRAMEF4O60810 478 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 CER1O95813 267 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 M6PRP20645 277 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 CLDN10P78369 228 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 LPAL2Q16609 132 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 FAM74A1Q5RGS3 127 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 STEAP1BQ6NZ63 245 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 ZNF705AQ6ZN79 300 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-209ENST00000537178 ESPNLQ6ZVH7 1005 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 RTL10Q7L3V2 364 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 SLC46A3Q7Z3Q1 461 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 SYT9Q86SS6 491 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 LGALS14Q8TCE9 139 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 STT3BQ8TCJ2 826 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 KIRREL1Q96J84 757 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 WDR76Q9H967 626 aa9.86□□□□□ -0.83
CLIP1-209ENST00000537178 EIF1BO60739 113 aaKnown RBP9.85□□□□□ -0.83
CLIP1-209ENST00000537178 ALPLP05186 524 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 TBPP20226 339 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 PTGER1P34995 402 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 GABRA4P48169 554 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 SLC39A5Q6ZMH5 540 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 TTC9BQ8N6N2 239 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 PISDQ9UG56 409 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 CDC14CA4D256 554 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 NXPH2O95156 264 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 AIFM1O95831 613 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 FOLR1P15328 257 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 ACKR3P25106 362 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 HOXD11P31277 338 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-209ENST00000537178 CLINT1Q14677 625 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLIP1-209ENST00000537178 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 SLC35D2Q76EJ3 337 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 LGI3Q8N145 548 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 LRRC18Q8N456 261 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 MFSD9Q8NBP5 474 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 HSD17B11Q8NBQ5 300 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 MRPL38Q96DV4 380 aaKnown RBP9.85□□□□□ -0.83
CLIP1-209ENST00000537178 KLF16Q9BXK1 252 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-209ENST00000537178 SHARPINQ9H0F6 387 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 PLAC1Q9HBJ0 212 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 NPAP1Q9NZP6 1156 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 NOSIPQ9Y314 301 aaKnown RBP9.85□□□□□ -0.83
CLIP1-209ENST00000537178 H0YGG7 62 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 SPINT2O43291 252 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 OR10J4P0C629 311 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 CASP3P42574 277 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 RRADP55042 308 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 DMWDQ09019 674 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 NXNL2Q5VZ03 156 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 SFXN4Q6P4A7 337 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 IL34Q6ZMJ4 242 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 LFNGQ8NES3 379 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 UTP23Q9BRU9 249 aaKnown RBP9.85□□□□□ -0.83
CLIP1-209ENST00000537178 ACTL7AQ9Y615 435 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 TRAV36DV7A0A075B6V5 113 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 A0A1W2PPH5 198 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 SERINC4A6NH21 518 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 MAKP20794 623 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 AADACP22760 399 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 CLDN12P56749 244 aa9.85□□□□□ -0.83
CLIP1-209ENST00000537178 TESK1Q15569 626 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms