RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TSPAN31Q12999 210 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PLA2G7Q13093 441 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 NNATQ16517 81 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 UPP1Q16831 310 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 C1orf94Q6P1W5 598 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF852Q6ZMS4 543 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SYS1Q8N2H4 156 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PGBD5Q8N414 524 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF283Q8N7M2 679 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 OR4D6Q8NGJ1 314 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 EGLN1Q9GZT9 426 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TOLLIPQ9H0E2 274 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 SLC17A5Q9NRA2 495 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 IL36AQ9UHA7 158 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 EXOGQ9Y2C4 368 aaKnown RBP4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ANK1P16157 1881 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 LINC00587B1AMM8 73 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM189-UBE2V1I3L0A0 370 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TAAR5O14804 337 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CD63P08962 238 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 PRSS58Q8IYP2 241 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF417Q8TAU3 575 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 FNDC9Q8TBE3 224 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM239Q8WW34 195 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 DMRT3Q9NQL9 472 aa4.99□□□□□ -1.61
PTPRD-213ENST00000537002 CLDN4O14493 209 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 H2BFMP0C1H6 154 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CTNNB1P35222 781 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CLDN6P56747 220 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 IL10RAQ13651 578 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 MEF2DQ14814 521 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 DCST2Q5T1A1 773 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 C10orf91Q5T1B1 145 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 RPL22L1Q6P5R6 122 aaKnown RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ETV3LQ6ZN32 361 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ANGPTL5Q86XS5 388 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CBLN2Q8IUK8 224 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM99Q8N816 258 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 OR1J1Q8NGS3 322 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 PHOSPHO1Q8TCT1 267 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CYB5D2Q8WUJ1 264 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 LIN37Q96GY3 246 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ST6GALNAC5Q9BVH7 336 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SEBOXQ9HB31 216 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 KCNK6Q9Y257 313 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SMCHD1A6NHR9 2005 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF236Q9UL36 1845 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 IGLV3-10A0A075B6K4 115 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 GPR31O00270 319 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CCL16O15467 120 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 LIMS3P0CW19 117 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 LIMS4P0CW20 117 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF28P17035 718 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CD80P33681 288 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 RGRP47804 291 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SLC6A11P48066 632 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 RTP2Q5QGT7 225 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 FAHD2BQ6P2I3 314 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF322Q6U7Q0 402 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 C1QL4Q86Z23 238 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SLC30A7Q8NEW0 376 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 FAHD2AQ96GK7 314 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 RSRP1Q9BUV0 290 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF426Q9BUY5 554 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 TINAGL1Q9GZM7 467 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CHST8Q9H2A9 424 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SPATA6Q9NWH7 488 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 GPR160Q9UJ42 338 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 C5orf52A6NGY3 159 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SPP1P10451 314 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CXCL3P19876 107 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 C5AR1P21730 350 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 CDK2P24941 298 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SELENOPP49908 381 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 C6orf132Q5T0Z8 1188 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SFRP5Q5T4F7 317 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 LFNGQ8NES3 379 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 OR9A2Q8NGT5 310 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 GTF3AQ92664 365 aaKnown RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SMARCD2Q92925 531 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 NEIL2Q969S2 332 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 WBP1Q96G27 269 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF558Q96NG5 402 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 GPR174Q9BXC1 333 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 Q9N2J8 555 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 COLEC10Q9Y6Z7 277 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 FAM230AA0A1W2PPH8 454 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 C1orf226A1L170 272 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 HEPACAM2A8MVW5 462 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 LY86O95711 162 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SFTA3P0C7M3 94 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 MMP11P24347 488 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 MPGP29372 298 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 RAP1AP62834 184 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 FABP9Q0Z7S8 132 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 SLC14A1Q13336 389 aa4.98□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF660Q6AZW8 331 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 KCTD18Q6PI47 426 aaPredicted RBP4.98□□□□□ -1.61
PTPRD-213ENST00000537002 DCAF4L2Q8NA75 395 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms