RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 FADDQ13158 208 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 PMS2P3Q13401 168 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 MAD2L1BPQ15013 274 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RGS7BPQ6MZT1 257 aaPredicted RBP11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TMEM154Q6P9G4 183 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 C6orf89Q6UWU4 347 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 KRT73Q86Y46 540 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 C20orf196Q8IYI0 205 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 MIER2Q8N344 545 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 RAB39BQ96DA2 213 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SLC47A1Q96FL8 570 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 LRR1Q96L50 414 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 FOXB1Q99853 325 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TMEM109Q9BVC6 243 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 TMEM27Q9HBJ8 222 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 SLC6A13Q9NSD5 602 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 ZIM2Q9NZV7 527 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 FZR1Q9UM11 496 aa11.15□□□□□ -0.62
TNFRSF1A-207ENST00000535958 A0A087WUJ7 227 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LOC102725191A0A1B0GVB3 256 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 A0A1B0GWA3 101 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC22A23A1A5C7 686 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TPD52L2O43399 206 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR6A2O95222 327 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 NAT2P11245 290 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF14P17017 642 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 AHCYP23526 432 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 COL8A2P25067 703 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PRKAR1BP31321 381 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LIMS1P48059 325 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SEC24CP53992 1094 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RGS8P57771 180 aaPredicted RBP11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MRPS11P82912 194 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PUDPQ08623 228 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ALKBH6Q3KRA9 238 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 GTDC1Q4AE62 458 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 FAM91A1Q658Y4 838 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ULK3Q6PHR2 472 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 GOLGA6L1Q8N7Z2 621 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ANKRD42Q8N9B4 389 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SCAIQ8N9R8 606 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 AENQ8WTP8 325 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MAL2Q969L2 176 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 VPS33AQ96AX1 596 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SUCNR1Q9BXA5 334 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BCL2L10Q9HD36 194 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 A4GALTQ9NPC4 353 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 SLC52A3Q9NQ40 469 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MED29Q9NX70 200 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 B3GNT2Q9NY97 397 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 KLHL14Q9P2G3 628 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TESQ9UGI8 421 aaKnown RBP11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CHST2Q9Y4C5 530 aa11.14□□□□□ -0.63
TNFRSF1A-207ENST00000535958 A0A0G2JMP0 313 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 A0A0X1KG70 313 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CLIC1O00299 241 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 WIPF1O43516 503 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 FARS2O95363 451 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BCL10O95999 233 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MT-ND5P03915 603 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 IGFBP1P08833 259 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF35P13682 527 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ETS2P15036 469 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 COMPP49747 757 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 POLR2JP52435 117 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 AQP5P55064 265 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 HILS1P60008 231 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 STX1BP61266 288 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TEKQ02763 1124 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RAB39AQ14964 217 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RGNQ15493 299 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MMEL1Q495T6 779 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PHYHD1Q5SRE7 291 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ACSM5Q6NUN0 579 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 USP43Q70EL4 1123 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PEG10Q86TG7 708 aaKnown RBP11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LRP11Q86VZ4 500 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CARM1Q86X55 608 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 BPIFB2Q8N4F0 458 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LSMEM1Q8N8F7 131 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ICA1LQ8NDH6 482 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR4M2Q8NGB6 313 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 OR6S1Q8NH40 331 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 FAM216AQ8WUB2 273 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 ZNF665Q9H7R5 613 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 RNF121Q9H920 327 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CDH20Q9HBT6 801 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 THAP1Q9NVV9 213 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 TAAR3PQ9P1P4 343 aa11.13□□□□□ -0.63
TNFRSF1A-207ENST00000535958 DYSFO75923 2080 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LOC105371242A0A075B767 164 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 PRORSD1PA6NEY8 169 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 UBDO15205 165 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 CDC14BO60729 498 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 FZD7O75084 574 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 MPZL1O95297 269 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 HPRP00739 348 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 LCKP06239 509 aa11.12□□□□□ -0.63
TNFRSF1A-207ENST00000535958 VIMP08670 466 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms