RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 HOXB6P17509 224 aaKnown RBP7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 CFL1P23528 166 aaKnown RBP7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 EDNRAP25101 427 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ETV6P41212 452 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 CRATP43155 626 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 NR4A2P43354 598 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 RPS5P46782 204 aaKnown RBP7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 PTH2RP49190 550 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 OR2B6P58173 313 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 S100A12P80511 92 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 MRPS15P82914 257 aaKnown RBP7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 PRKCDQ05655 676 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 IL18R1Q13478 541 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 GNA13Q14344 377 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 P2RY6Q15077 328 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 TAB1Q15750 504 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 STK11Q15831 433 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 NEDD8Q15843 81 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 GTDC1Q4AE62 458 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 CYBRD1Q53TN4 286 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 MRPL2Q5T653 305 aaKnown RBP7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ABLIM2Q6H8Q1 611 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 LCN8Q6JVE9 175 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 Q6ZT83 130 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 Q71RC1 249 aaPredicted RBP7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 GALNT5Q7Z7M9 940 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 BIVMQ86UB2 503 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 LYSMD2Q8IV50 215 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 CMIPQ8IY22 773 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF100Q8IYN0 542 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 IL17RDQ8NFM7 739 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 OR10Z1Q8NGY1 313 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 DYNC2LI1Q8TCX1 351 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 TMEM171Q8WVE6 324 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 AKAP1Q92667 903 aaKnown RBP eCLIP7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF566Q969W8 418 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ARL5BQ96KC2 179 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 OR52B2Q96RD2 323 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 FUNDC2Q9BWH2 189 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 POTEKPQ9BYX7 375 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 OR11A1Q9GZK7 315 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 NGBQ9NPG2 151 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 SLC6A13Q9NSD5 602 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ACOXLQ9NUZ1 547 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 ZIM2Q9NZV7 527 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 EMC3Q9P0I2 261 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 TMEM181Q9P2C4 612 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 P2RX2Q9UBL9 471 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 TMED7Q9Y3B3 224 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 RNF115Q9Y4L5 304 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 PRR14LQ5THK1 2151 aa7.56□□□□□ -1.2
SFSWAP-202ENST00000535202 PNMA8CA0A1B0GUJ8 204 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 TMEM72A0PK05 275 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 HMX3A6NHT5 357 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 SMAD7O15105 426 aaKnown RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 UBDO15205 165 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 NDUFA2O43678 99 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 PMS2P2O95744 297 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 IGHV3-9P01782 118 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 BCHEP06276 602 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 DBIP07108 87 aaKnown RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 CD3EP07766 207 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 GNAO1P09471 354 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ETFAP13804 333 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 RPS4Y1P22090 263 aaKnown RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 NR4A1P22736 598 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 IGHV1-2P23083 117 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 CRHBPP24387 322 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 TACR3P29371 465 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 TALDO1P37837 337 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 HTR3AP46098 478 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ETV1P50549 477 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 POLR2HP52434 150 aaKnown RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 POLR2JP52435 117 aaKnown RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 DSTNP60981 165 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 MVKQ03426 396 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 SQLEQ14534 574 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 COQ5Q5HYK3 327 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 RPS26P11Q5JNZ5 115 aaPredicted RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 NCMAPQ5T1S8 102 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ATAD3CQ5T2N8 411 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 TTC23Q5W5X9 447 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ZNF836Q6ZNA1 936 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 THAP5Q7Z6K1 395 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ATG4DQ86TL0 474 aaPredicted RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ADCK1Q86TW2 530 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 VRK2Q86Y07 508 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 ADGRG3Q86Y34 549 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 CCDC103Q8IW40 242 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 UBE2J2Q8N2K1 259 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 MIER2Q8N344 545 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 CLIP4Q8N3C7 705 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 OR9I1Q8NGQ6 314 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 OR52P1PQ8NH57 321 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 PIGXQ8TBF5 258 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 HSD17B8Q92506 261 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 PROX1Q92786 737 aa7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 POP5Q969H6 163 aaKnown RBP7.55□□□□□ -1.2
SFSWAP-202ENST00000535202 DDIT4LQ96D03 193 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms