RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 OGFOD2Q6N063 350 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 C6orf89Q6UWU4 347 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 ZNF627Q7L945 461 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 C22orf15Q8WYQ4 148 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 TXNDC15Q96J42 360 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 LRR1Q96L50 414 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 FOXB1Q99853 325 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 ZNF747Q9BV97 191 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 ULBP2Q9BZM5 246 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 ZNF696Q9H7X3 374 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 MEAF6Q9HAF1 191 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 B3GAT2Q9NPZ5 323 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 MED29Q9NX70 200 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 TAAR3PQ9P1P4 343 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 KLHL14Q9P2G3 628 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 SLC7A8Q9UHI5 535 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 IFT52Q9Y366 437 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 PPIAL4AQ9Y536 164 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
CTSB-230ENST00000534149 TRAV36DV7A0A075B6V5 113 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 A0A0G2JPF8 293 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 LOC102725191A0A1B0GVB3 256 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 HNRNPCL2B2RXH8 293 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 HNRNPCL3B7ZW38 293 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 HNRNPCL1O60812 293 aaKnown RBP12.75□□□□□ -0.37
CTSB-230ENST00000534149 CLPTM1O96005 669 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 PATE4P0C8F1 98 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 HNRNPCL4P0DMR1 293 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 LSP1P33241 339 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 SLC1A6P48664 564 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 CAMK2DQ13557 499 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 GTDC1Q4AE62 458 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 DCAF12L2Q5VW00 463 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 RGS7BPQ6MZT1 257 aaPredicted RBP12.75□□□□□ -0.37
CTSB-230ENST00000534149 SHISA2Q6UWI4 295 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 ADPRHL1Q8NDY3 354 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 OR6N1Q8NGY5 312 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 NANPQ8TBE9 248 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 RAB39BQ96DA2 213 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 ZBTB18Q99592 522 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 TPT1P8Q9HAU6 139 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 PNPOQ9NVS9 261 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.75□□□□□ -0.37
CTSB-230ENST00000534149 CORINQ9Y5Q5 1042 aa12.75□□□□□ -0.37
CTSB-230ENST00000534149 A0A087WUJ7 227 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 A0A1B0GWA3 101 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 SDHDO14521 159 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 UBL3O95164 117 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 ANP32DO95626 131 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 IGHV2-5P01817 119 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 FAM157BP0CG42 384 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 HTR2AP28223 471 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 DEFA6Q01524 100 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 ZP4Q12836 540 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 TMEM154Q6P9G4 183 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 C5orf46Q6UWT4 87 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
CTSB-230ENST00000534149 NET1Q7Z628 596 aaPredicted RBP12.74□□□□□ -0.37
CTSB-230ENST00000534149 MIER2Q8N344 545 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 FGFBP3Q8TAT2 258 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 RNF217Q8TC41 542 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 VPS33AQ96AX1 596 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 OR51B6Q9H340 312 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 DENND2DQ9H6A0 471 aaPredicted RBP12.74□□□□□ -0.37
CTSB-230ENST00000534149 C12orf10Q9HB07 376 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 HINT3Q9NQE9 182 aaKnown RBP12.74□□□□□ -0.37
CTSB-230ENST00000534149 DDX28Q9NUL7 540 aaKnown RBP12.74□□□□□ -0.37
CTSB-230ENST00000534149 HAO1Q9UJM8 370 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 GPR45Q9Y5Y3 372 aa12.74□□□□□ -0.37
CTSB-230ENST00000534149 TMEM247A6NEH6 219 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 J3QLI3 93 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 SERPINI2O75830 405 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 PRSS23O95084 383 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 NUDT7P0C024 238 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 HKR1P10072 659 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 BGNP21810 368 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 KLF3P57682 345 aaPredicted RBP12.73□□□□□ -0.37
CTSB-230ENST00000534149 ERVS71-1P61550 626 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 FOXL1Q12952 345 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 ALG10BQ5I7T1 473 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 COMTD1Q86VU5 262 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 SNX32Q86XE0 403 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 SKA3Q8IX90 412 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 PAQR4Q8N4S7 273 aaPredicted RBP12.73□□□□□ -0.37
CTSB-230ENST00000534149 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 GTF3AQ92664 365 aaKnown RBP12.73□□□□□ -0.37
CTSB-230ENST00000534149 MAL2Q969L2 176 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 SLC41A3Q96GZ6 507 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 RSPO3Q9BXY4 272 aaPredicted RBP12.73□□□□□ -0.37
CTSB-230ENST00000534149 OPN4Q9UHM6 478 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 FBXL3Q9UKT7 428 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 WIPI2Q9Y4P8 454 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 CACNG2Q9Y698 323 aa12.73□□□□□ -0.37
CTSB-230ENST00000534149 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
CTSB-230ENST00000534149 IGHV1-69-2A0A0G2JMI3 117 aa12.72□□□□□ -0.37
CTSB-230ENST00000534149 ZNF726A6NNF4 738 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms