RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 TSPO2Q5TGU0 170 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 KRT80Q6KB66 452 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 FAM45BPQ6NSW5 357 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 TMEM107Q6UX40 140 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 RPS27LQ71UM5 84 aaKnown RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 MEPCEQ7L2J0 689 aaKnown RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 LINGO2Q7L985 606 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 MAVSQ7Z434 540 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 COMMD6Q7Z4G1 85 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 CPLX4Q7Z7G2 160 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 ZC3HC1Q86WB0 502 aaKnown RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 NUDT13Q86X67 352 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 WDFY1Q8IWB7 410 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 CNTN4Q8IWV2 1026 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 LMNTD2Q8IXW0 634 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 SPARTQ8N0X7 666 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 GALNT4Q8N4A0 578 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 RNF10Q8N5U6 811 aaKnown RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 C11orf44Q8N8P7 122 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 GBP7Q8N8V2 638 aaPredicted RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 SYT14Q8NB59 555 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 DEFB108BQ8NET1 73 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 TRIM58Q8NG06 486 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 OR4M2Q8NGB6 313 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 CEP70Q8NHQ1 597 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 B4GALNT2Q8NHY0 566 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 RFWD2Q8NHY2 731 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 FAM45AQ8TCE6 357 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 GPR119Q8TDV5 335 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 SGCDQ92629 289 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 RDH5Q92781 318 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 UBE2E3Q969T4 207 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 CPNE4Q96A23 557 aaPredicted RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 APH1AQ96BI3 265 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 CFAP36Q96G28 342 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 C16orf58Q96GQ5 468 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC38A2Q96QD8 506 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 OR5B2Q96R09 309 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 MYCBPQ99417 103 aaPredicted RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 DPCDQ9BVM2 203 aaPredicted RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 MRPL37Q9BZE1 423 aaKnown RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 CHIAQ9BZP6 476 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 MARCH7Q9H992 704 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 DYNLRB1Q9NP97 96 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 EQTNQ9NQ60 294 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 TIGARQ9NQ88 270 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC6A13Q9NSD5 602 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 NUP50Q9UKX7 468 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 RAB21Q9UL25 225 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 CARD8Q9Y2G2 431 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 NOSIPQ9Y314 301 aaKnown RBP2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 JRKLQ9Y4A0 524 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 MMP24Q9Y5R2 645 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF780BQ9Y6R6 833 aa2.5□□□□□ -2.01
CHMP4A-208ENST00000534106 WNK2Q9Y3S1 2297 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 A0A087WZY1 265 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 IGHV2OR16-5A0A0B4J2B6 119 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 WI2-2373I1.2A0A1W2PRP0 233 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CCDC189A1A4V9 331 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 C1orf226A1L170 272 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 MIF4GDA9UHW6 222 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 MYO1GB0I1T2 1018 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TMEM233B4DJY2 109 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SUPT3HB4E1H0 165 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TRIM49D1C9J1S8 452 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 H0YIV9 168 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CLDN34H7C241 214 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 J3QLI3 93 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 K7EPI3 171 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 FOXE1O00358 373 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 OR7A17O14581 309 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 DHHO43323 396 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 RAD51CO43502 376 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 PIP5K1CO60331 668 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 PLOD3O60568 738 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 MRPL33O75394 65 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SUPT3HO75486 399 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 RP2O75695 350 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 BCAS2O75934 225 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 SEC14L2O76054 403 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 OXSR1O95747 527 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 NUDT14O95848 222 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 IGHV2-5P01817 119 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CRYAAP02489 173 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 FGGP02679 453 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 VIMP08670 466 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 IL3P08700 152 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 IL6RP08887 468 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CSF1P09603 554 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 MLNP12872 115 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 TSPAN8P19075 237 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 EFNA1P20827 205 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ATP5F1P24539 256 aaPredicted RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 PPIFP30405 207 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 CD80P33681 288 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 ELK3P41970 407 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 PTDSS1P48651 473 aaKnown RBP2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 FNTAP49354 379 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 DIO1P49895 249 aa2.49□□□□□ -2.01
CHMP4A-208ENST00000534106 KHKP50053 298 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms