RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	HOXD1	Q9GZZ0	328 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	GAL3ST2	Q9H3Q3	398 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	UGT1A10	Q9HAW8	530 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	ADGRL4	Q9HBW9	690 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	FGF22	Q9HCT0	170 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	MYOZ2	Q9NPC6	264 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	IL26	Q9NPH9	171 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	SLC39A1	Q9NY26	324 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	CLN8	Q9UBY8	286 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	SEC14L4	Q9UDX3	406 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	CD300A	Q9UGN4	299 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	CIDEB	Q9UHD4	219 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	PHF11	Q9UIL8	331 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	LNPEP	Q9UIQ6	1025 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	NUP50	Q9UKX7	468 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	PDE10A	Q9Y233	779 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	KIF13B	Q9NQT8	1826 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	MKI67	P46013	3256 aa	Known RBP	3.81	□□□□□ -1.8
ATM-223	ENST00000533979	KIAA1551	Q9HCM1	1747 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	CACNA1B	Q00975	2339 aa		3.81	□□□□□ -1.8
ATM-223	ENST00000533979	KIAA0100	Q14667	2235 aa	Known RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	DLG5	Q8TDM6	1919 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	MUC6	Q6W4X9	2439 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	KCNE1B	A0A087WTH5	132 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	IGKV3D-20	A0A0C4DH25	116 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	TRBV5-4	A0A0C4DH59	114 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	IQCM	A0A1B0GVH7	501 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	RNF212B	A8MTL3	300 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979		E9PQ18	207 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	C11orf98	E9PRG8	122 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	SLCO1B7	G3V0H7	640 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	PSTPIP1	O43586	416 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	TRMU	O75648	421 aa	Known RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	CALML3	P27482	149 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	DCK	P27707	260 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	OPRD1	P41143	372 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	ETV5	P41161	510 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	MAGEA9	P43362	315 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	CLDN18	P56856	261 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	VBP1	P61758	197 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	ZNF33B	Q06732	778 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	CDH17	Q12864	832 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	RCAN2	Q14206	197 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	FASTKD3	Q14CZ7	662 aa	Known RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	AANAT	Q16613	207 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	ECSCR	Q19T08	205 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	HSDL1	Q3SXM5	330 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	GTDC1	Q4AE62	458 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	LY6G6F	Q5SQ64	297 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	PVRIG	Q6DKI7	326 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979		Q6ZSR3	168 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	SLC16A14	Q7RTX9	510 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	OR6S1	Q8NH40	331 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	PLPPR1	Q8TBJ4	325 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	MRGPRD	Q8TDS7	321 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	3.8	□□□□□ -1.8	7e-6	■■■■■ 27.5
ATM-223	ENST00000533979	POM121L2	Q96KW2	1035 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	RCHY1	Q96PM5	261 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	OR5B2	Q96R09	309 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	TNFRSF13C	Q96RJ3	184 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	ACBD6	Q9BR61	282 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	ZNF670	Q9BS34	389 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	SLC35A5	Q9BS91	424 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	MCRIP2	Q9BUT9	160 aa	Known RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	NEUROG2	Q9H2A3	272 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	UCK1	Q9HA47	277 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	LY9	Q9HBG7	655 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	MEPE	Q9NQ76	525 aa	Predicted RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	NRBP2	Q9NSY0	501 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	CUTC	Q9NTM9	273 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	NUDT15	Q9NV35	164 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	WRAP73	Q9P2S5	460 aa	Predicted RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	CTSF	Q9UBX1	484 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	DDX19B	Q9UMR2	479 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	EXOG	Q9Y2C4	368 aa	Known RBP	3.8	□□□□□ -1.8
ATM-223	ENST00000533979	VCAN	P13611	3396 aa		3.8	□□□□□ -1.8
ATM-223	ENST00000533979	IGHV3-20	A0A0C4DH32	117 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979		A0A1B0GUA9	196 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979		A0A1B0GUS0	222 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979		A0A1B0GVY2	172 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	GSTTP1	A0A1W2PQM5	241 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	IQCF5	A8MTL0	148 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	GOLGA8M	H3BSY2	632 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	DYNC1I1	O14576	645 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	CXCL13	O43927	109 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	PFKFB2	O60825	505 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	TSPAN13	O95857	204 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	OR9G9	P0C7N8	305 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	UBC	P0CG48	685 aa	Known RBP	3.79	□□□□□ -1.8
ATM-223	ENST00000533979	CCL2	P13500	99 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	CD1D	P15813	335 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	POLR2E	P19388	210 aa	Known RBP	3.79	□□□□□ -1.8
ATM-223	ENST00000533979	EIF2S2	P20042	333 aa	Known RBP	3.79	□□□□□ -1.8
ATM-223	ENST00000533979	CD82	P27701	267 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	RFX3	P48380	749 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	PAX9	P55771	341 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	RAD51	Q06609	339 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	SELENBP1	Q13228	472 aa		3.79	□□□□□ -1.8
ATM-223	ENST00000533979	FASTK	Q14296	549 aa	Known RBP	3.79	□□□□□ -1.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms