RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 POLR2HP52434 150 aaKnown RBP8.72□□□□□ -1.01
CSDE1-215ENST00000533818 CDH13P55290 713 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 UCP2P55851 309 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 PMS2P3Q13401 168 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 FASTKD3Q14CZ7 662 aaKnown RBP8.72□□□□□ -1.01
CSDE1-215ENST00000533818 ZNF141Q15928 474 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 ANKRD26P1Q6NSI1 321 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 SLC27A4Q6P1M0 643 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 KLC3Q6P597 504 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 PIWIL3Q7Z3Z3 882 aaKnown RBP8.72□□□□□ -1.01
CSDE1-215ENST00000533818 KLBQ86Z14 1044 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 ZNF584Q8IVC4 421 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 ZNF283Q8N7M2 679 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 OR4C13Q8NGP0 309 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 PPP1R35Q8TAP8 253 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 IPCEF1Q8WWN9 437 aaPredicted RBP8.72□□□□□ -1.01
CSDE1-215ENST00000533818 CDKL2Q92772 493 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 CITED2Q99967 270 aaPredicted RBP8.72□□□□□ -1.01
CSDE1-215ENST00000533818 BCL2L14Q9BZR8 327 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 CDH20Q9HBT6 801 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 ZCCHC3Q9NUD5 404 aaKnown RBP8.72□□□□□ -1.01
CSDE1-215ENST00000533818 EXD2Q9NVH0 621 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 SIRT5Q9NXA8 310 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 ZNF224Q9NZL3 707 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 ZNF225Q9UK10 706 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 RASD1Q9Y272 281 aa8.72□□□□□ -1.01
CSDE1-215ENST00000533818 STX16-NPEPL1H3BU86 382 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 M0R3G1 203 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 STX16O14662 325 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 RAD51CO43502 376 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 BCAS1O75363 584 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-215ENST00000533818 ADH4P08319 380 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 CCL2P13500 99 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 TACR3P29371 465 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 PGM1P36871 562 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 MAP2K6P52564 334 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 AQP5P55064 265 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 ARL4CP56559 192 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 TNFAIP6P98066 277 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-215ENST00000533818 PDIA2Q13087 525 aaKnown RBP8.71□□□□□ -1.02
CSDE1-215ENST00000533818 EMBQ6PCB8 327 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 KDM8Q8N371 416 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 PIK3C3Q8NEB9 887 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 SLC30A7Q8NEW0 376 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 GRK7Q8WTQ7 553 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 DDB2Q92466 427 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 LHX4Q969G2 390 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 FAM120BQ96EK7 910 aaKnown RBP8.71□□□□□ -1.02
CSDE1-215ENST00000533818 NEIL1Q96FI4 390 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-215ENST00000533818 C3orf30Q96M34 536 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 SDF2Q99470 211 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 PRPF18Q99633 342 aaKnown RBP8.71□□□□□ -1.02
CSDE1-215ENST00000533818 DESI2Q9BSY9 194 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 CDADC1Q9BWV3 514 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 TAPBPLQ9BX59 468 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 MIOXQ9UGB7 285 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 ZDHHC8Q9ULC8 765 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 GUCA1BQ9UMX6 200 aa8.71□□□□□ -1.02
CSDE1-215ENST00000533818 FAF1Q9UNN5 650 aaPredicted RBP8.71□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF879B4DU55 563 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 ENSAO43768 121 aaKnown RBP8.7□□□□□ -1.02
CSDE1-215ENST00000533818 UGT2B17O75795 530 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 UBL3O95164 117 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 CHRM2P08172 466 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 CD55P08174 381 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 PATE4P0C8F1 98 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 B4GALT1P15291 398 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 SLC6A2P23975 617 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 EPHA3P29320 983 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 PITPNBP48739 271 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 HTR6P50406 440 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 COX10Q12887 443 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 GRTP1Q5TC63 336 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 PTOV1Q86YD1 416 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 FAM71CQ8NEG0 241 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 METTL6Q8TCB7 284 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 CLPTM1LQ96KA5 538 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 EGLN2Q96KS0 407 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 SIGLEC11Q96RL6 698 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 ARHGDIGQ99819 225 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 RNF121Q9H920 327 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 CYSLTR2Q9NS75 346 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 NOP53Q9NZM5 478 aaKnown RBP8.7□□□□□ -1.02
CSDE1-215ENST00000533818 SLC17A7Q9P2U7 560 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 POFUT2Q9Y2G5 429 aa8.7□□□□□ -1.02
CSDE1-215ENST00000533818 POLR3HQ9Y535 204 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-215ENST00000533818 A0A1W2PRX2 142 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 FCMRO60667 390 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 KLHL2O95198 593 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 PF4P02776 101 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 C2P06681 752 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 KRT16P08779 473 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 FBP1P09467 338 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 PF4V1P10720 104 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 MMP9P14780 707 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 ZNF43P17038 809 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 EFNA1P20827 205 aaPredicted RBP8.69□□□□□ -1.02
CSDE1-215ENST00000533818 HMOX2P30519 316 aa8.69□□□□□ -1.02
CSDE1-215ENST00000533818 LIPAP38571 399 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms