RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CDK16Q00536 496 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 NCBP1Q09161 790 aaKnown RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 AQP6Q13520 282 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 STK11Q15831 433 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 UBE2SQ16763 222 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 KLHL38Q2WGJ6 581 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 TTLL9Q3SXZ7 439 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 SFT2D3Q587I9 215 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 PDZK1Q5T2W1 519 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 OR4F3Q6IEY1 312 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 C19orf35Q6ZS72 473 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 NCCRP1Q6ZVX7 275 aaPredicted RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 UTS2BQ765I0 119 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 NUDCD3Q8IVD9 361 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF679Q8IYX0 411 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 PGAM4Q8N0Y7 254 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 OR5W2Q8NH69 310 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 FAM110BQ8TC76 370 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 MAGEE2Q8TD90 523 aaPredicted RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 PYROXD1Q8WU10 500 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 SDR42E1Q8WUS8 393 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 GEMIN6Q8WXD5 167 aaKnown RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 SGK3Q96BR1 496 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 RBM14Q96PK6 669 aaKnown RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 TSGA13Q96PP4 275 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 GABARAPL3Q9BY60 117 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 PLA2G12AQ9BZM1 189 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 ING2Q9H160 280 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 RMND5AQ9H871 391 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 MRPL47Q9HD33 250 aaKnown RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 TM9SF3Q9HD45 589 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 ZDHHC4Q9NPG8 344 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 SIRT7Q9NRC8 400 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 PTBP2Q9UKA9 531 aaKnown RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 DHX57Q6P158 1386 aaKnown RBP1.43□□□□□ -2.18
BRCA2-205ENST00000533776 ITGB4P16144 1822 aa1.43□□□□□ -2.18
BRCA2-205ENST00000533776 IGSF9BQ9UPX0 1349 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 IGKV1D-13A0A0B4J2D9 117 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 A0A1W2PP18 115 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 INS-IGF2F8WCM5 200 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 NOL3O60936 208 aaKnown RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ZDHHC11BP0C7U3 371 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 IGKV1-13P0DP09 117 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 PRPS2P11908 318 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 OMGP23515 440 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 NPY1RP25929 384 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 RORAP35398 523 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 DUSP3P51452 185 aaPredicted RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 CRYBB1P53674 252 aaPredicted RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 SUB1P53999 127 aaKnown RBP eCLIP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ATP1B3P54709 279 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 SLC7A9P82251 487 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 KLHL30Q0D2K2 578 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 SCRN3Q0VDG4 424 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 FILIP1LQ4L180 1135 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 VAX1Q5SQQ9 334 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 SLC25A24Q6NUK1 477 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 SLC25A34Q6PIV7 304 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF547Q8IVP9 402 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 OR2T3Q8NH03 318 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 EMG1Q92979 244 aaKnown RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 SYAP1Q96A49 352 aaPredicted RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 MED8Q96G25 268 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 LINC00477Q96M19 166 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF578Q96N58 590 aaPredicted RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF641Q96N77 438 aaPredicted RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 MS4A4EQ96PG1 132 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 MTMR9Q96QG7 549 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ZNF2Q9BSG1 426 aaPredicted RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 UGT1A7Q9HAW7 530 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 UGT1A10Q9HAW8 530 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 UGT1A8Q9HAW9 530 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 WFDC1Q9HC57 220 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 MCCC2Q9HCC0 563 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ADAP2Q9NPF8 381 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 CGNQ9P2M7 1197 aaKnown RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 CD84Q9UIB8 345 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 PACSIN2Q9UNF0 486 aaPredicted RBP1.42□□□□□ -2.18
BRCA2-205ENST00000533776 ATP6V0A2Q9Y487 856 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 DOCK9Q9BZ29 2069 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 MSH6P52701 1360 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 PNPLA6Q8IY17 1366 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 CARMIL3Q8ND23 1372 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 GPR179Q6PRD1 2367 aa1.42□□□□□ -2.18
BRCA2-205ENST00000533776 MN1Q10571 1320 aaPredicted RBP1.41□□□□□ -2.18
BRCA2-205ENST00000533776 PIKFYVEQ9Y2I7 2098 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 IGLV2-18A0A075B6J9 118 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 IGHV5-51A0A0C4DH38 117 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 IGHV3-66A0A0C4DH42 116 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 A0A0U1RQS6 177 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 A0A1B0GVI7 797 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 ANGPT2O15123 496 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 KMOO15229 486 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 GAPDHP04406 335 aaKnown RBP1.41□□□□□ -2.18
BRCA2-205ENST00000533776 ADRA2AP08913 450 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 CISD3P0C7P0 127 aa1.41□□□□□ -2.18
BRCA2-205ENST00000533776 UBTFL1P0CB47 393 aaPredicted RBP1.41□□□□□ -2.18
BRCA2-205ENST00000533776 MUC1P15941 1255 aaPredicted RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms