RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PRPS1P60891 318 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 FHL1Q13642 323 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 CEACAM16Q2WEN9 425 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 CARD17Q5XLA6 110 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 ANKRD16Q6P6B7 361 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 C20orf204Q6ZNR8 217 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 MOSPD2Q8NHP6 518 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 PIP5K1AQ99755 562 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 FOXC2Q99958 501 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 FUZQ9BT04 418 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 CXXC4Q9H2H0 198 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 UBTD1Q9HAC8 227 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 FAM32AQ9Y421 112 aaKnown RBP17.89■□□□□ 0.46
CCS-208ENST00000533244 MAGED1Q9Y5V3 778 aaPredicted RBP17.89■□□□□ 0.46
CCS-208ENST00000533244 V9GYQ6 96 aa17.89■□□□□ 0.46
CCS-208ENST00000533244 M0R3G1 203 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 HOXB1P14653 301 aaPredicted RBP17.89■□□□□ 0.45
CCS-208ENST00000533244 ITGA2P17301 1181 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 HOXC12P31275 282 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 ARF1P84077 181 aaKnown RBP17.89■□□□□ 0.45
CCS-208ENST00000533244 KEAP1Q14145 624 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 MTX3Q5HYI7 312 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 LCN8Q6JVE9 175 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 TBPL2Q6SJ96 375 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 ZNF730Q6ZMV8 503 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 TMPRSS11FQ6ZWK6 438 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 ZNF627Q7L945 461 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 IGFBPL1Q8WX77 278 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 TMEM54Q969K7 222 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 SLC25A44Q96H78 314 aaPredicted RBP17.89■□□□□ 0.45
CCS-208ENST00000533244 SEPHS2Q99611 448 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 INIPQ9NRY2 104 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 ITGB1BP2Q9UKP3 347 aa17.89■□□□□ 0.45
CCS-208ENST00000533244 TCRBV5S2A0A599 114 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 ZNF99A8MXY4 864 aaPredicted RBP17.88■□□□□ 0.45
CCS-208ENST00000533244 HS3ST1O14792 307 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 CLOCKO15516 846 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 DIRAS1O95057 198 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 F13BP05160 661 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 PGA4P0DJD7 388 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 PGA3P0DJD8 388 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 PTAFRP25105 342 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 CSNK1A1P48729 337 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 ZNF83P51522 516 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 TRIM25Q14258 630 aaKnown RBP17.88■□□□□ 0.45
CCS-208ENST00000533244 MELKQ14680 651 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 ANKDD1AQ495B1 522 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 PODNL1Q6PEZ8 512 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 KLHL17Q6TDP4 642 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 TMEM108Q6UXF1 575 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 ZNF611Q8N823 705 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 OR6N1Q8NGY5 312 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 ALPK1Q96QP1 1244 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 IL1RAPQ9NPH3 570 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 B3GAT2Q9NPZ5 323 aa17.88■□□□□ 0.45
CCS-208ENST00000533244 PRRC2AP48634 2157 aaKnown RBP17.87■□□□□ 0.45
CCS-208ENST00000533244 A0A1W2PRG6 482 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 SHISA9B4DS77 424 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 PDE5AO76074 875 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 BCL10O95999 233 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 WNT11O96014 354 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 PAX7P23759 505 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 CD40P25942 277 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 SLC9A3P48764 834 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 MS4A2Q01362 244 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 LAPTM4AQ15012 233 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 HIST3H3Q16695 136 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 DEFB113Q30KQ7 82 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 KLHL24Q6TFL4 600 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 CYP2R1Q6VVX0 501 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 MEX3DQ86XN8 651 aaKnown RBP17.87■□□□□ 0.45
CCS-208ENST00000533244 LRRC75AQ8NAA5 344 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 KBTBD8Q8NFY9 601 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 ASB10Q8WXI3 467 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 AKAP1Q92667 903 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCS-208ENST00000533244 ZNF566Q969W8 418 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 MRPL13Q9BYD1 178 aaKnown RBP17.87■□□□□ 0.45
CCS-208ENST00000533244 ULBP2Q9BZM5 246 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 GLTPQ9NZD2 209 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 TMEM5Q9Y2B1 443 aa17.87■□□□□ 0.45
CCS-208ENST00000533244 A0A096LPE4 126 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 TRBV4-1A0A0J9YWV2 114 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 A0A1W2PPZ6 126 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 EFCAB9A8MZ26 197 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 CENPBD1B2RD01 187 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 CDC42EP2O14613 210 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 ABCD4O14678 606 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 FABP3P05413 133 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 SAGP10523 405 aaPredicted RBP17.86■□□□□ 0.45
CCS-208ENST00000533244 LIMS1P48059 325 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 DAP3P51398 398 aaKnown RBP17.86■□□□□ 0.45
CCS-208ENST00000533244 ART1P52961 327 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 SEC23BQ15437 767 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 ZNF672Q499Z4 452 aaPredicted RBP17.86■□□□□ 0.45
CCS-208ENST00000533244 ALG10Q5BKT4 473 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 FGD3Q5JSP0 725 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 ARMC4Q5T2S8 1044 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 PIWIL3Q7Z3Z3 882 aaKnown RBP17.86■□□□□ 0.45
CCS-208ENST00000533244 MCUR1Q96AQ8 359 aa17.86■□□□□ 0.45
CCS-208ENST00000533244 SLC7A6OSQ96CW6 309 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms