RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 RPS23P62266 143 aaKnown RBP10.69□□□□□ -0.7
CAPN1-223ENST00000533079 TUBA1BP68363 451 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 TUBA4AP68366 448 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 MYBPC1Q00872 1141 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 PTGR1Q14914 329 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 DPY19L1Q2PZI1 675 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 MIDNQ504T8 468 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 C1orf146Q5VVC0 180 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 TMEM225Q6GV28 225 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 ACSM5Q6NUN0 579 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 FRRS1Q6ZNA5 592 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 C1orf229Q6ZS94 237 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-223ENST00000533079 CREB3L2Q70SY1 520 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 TUBA1AQ71U36 451 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 ARPINQ7Z6K5 226 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 MYPOPQ86VE0 399 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-223ENST00000533079 RIMKLAQ8IXN7 391 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 TMEM99Q8N816 258 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 ZDHHC22Q8N966 263 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 NANPQ8TBE9 248 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 LRRC58Q96CX6 371 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 RAB39BQ96DA2 213 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 SLC6A7Q99884 636 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 C1orf50Q9BV19 199 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 DUSP26Q9BV47 211 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 TAPBPLQ9BX59 468 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 DPY30Q9C005 99 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 NARFLQ9H6Q4 476 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 ESM1Q9NQ30 184 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF275Q9NSD4 429 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-223ENST00000533079 STX18Q9P2W9 335 aaKnown RBP10.69□□□□□ -0.7
CAPN1-223ENST00000533079 REV1Q9UBZ9 1251 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 RCE1Q9Y256 329 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 RASD1Q9Y272 281 aa10.69□□□□□ -0.7
CAPN1-223ENST00000533079 A0A096LPE4 126 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 A0A1W2PPZ6 126 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 ZC3H12DA2A288 527 aaKnown RBP10.68□□□□□ -0.7
CAPN1-223ENST00000533079 AKR7A3O95154 331 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 CELA3BP08861 270 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 HSD17B1P14061 328 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 FPR2P25090 351 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 LMO4P61968 165 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 ROR2Q01974 943 aaKnown RBP10.68□□□□□ -0.7
CAPN1-223ENST00000533079 PLAURQ03405 335 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 CEACAM7Q14002 265 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 TRIM25Q14258 630 aaKnown RBP10.68□□□□□ -0.7
CAPN1-223ENST00000533079 GNA13Q14344 377 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 OR7A5Q15622 319 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF311Q5JNZ3 666 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 KRT80Q6KB66 452 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 NIPAL3Q6P499 406 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 LINGO2Q7L985 606 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 TMPRSS13Q9BYE2 586 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 MRPL37Q9BZE1 423 aaKnown RBP10.68□□□□□ -0.7
CAPN1-223ENST00000533079 OR51I1Q9H343 314 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 MUC13Q9H3R2 512 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 CRLF2Q9HC73 371 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 TREM2Q9NZC2 230 aa10.68□□□□□ -0.7
CAPN1-223ENST00000533079 A0A096LPI6 279 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 FXYD1O00168 92 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 RNASET2O00584 256 aaKnown RBP10.67□□□□□ -0.7
CAPN1-223ENST00000533079 AP3D1O14617 1153 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 ACOT8O14734 319 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 PPIHO43447 177 aaKnown RBP10.67□□□□□ -0.7
CAPN1-223ENST00000533079 HPXP02790 462 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 NR4A1P22736 598 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 SLC6A2P23975 617 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 CXCR1P25024 350 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 P2RY4P51582 365 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 NME5P56597 212 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 LRRC74AQ0VAA2 488 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 FUT5Q11128 374 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 NPRL3Q12980 569 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 FXNQ16595 210 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 PRAMEF8Q5VWM4 474 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 PRAMEF7Q5VXH5 474 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 DLEU7Q6UYE1 221 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 SLC15A3Q8IY34 581 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF440Q8IYI8 595 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 STMN2Q93045 179 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 ASB9Q96DX5 294 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 DUS3LQ96G46 650 aaKnown RBP10.67□□□□□ -0.7
CAPN1-223ENST00000533079 SH3GL1Q99961 368 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF665Q9H7R5 613 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF346Q9UL40 294 aaKnown RBP10.67□□□□□ -0.7
CAPN1-223ENST00000533079 ZNF281Q9Y2X9 895 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 CORINQ9Y5Q5 1042 aa10.67□□□□□ -0.7
CAPN1-223ENST00000533079 POM121CA8CG34 1229 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 FRS3O43559 492 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 SLC43A1O75387 559 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 UPK3AO75631 287 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 RP2O75695 350 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 MPZL1O95297 269 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 AVPP01185 164 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 OR12D1P0DN82 309 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 ADRA2CP18825 462 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 GLRXP35754 106 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 IL13RA1P78552 427 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 SLC34A1Q06495 639 aa10.66□□□□□ -0.7
CAPN1-223ENST00000533079 EPS8Q12929 822 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms