RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
NXF1-214ENST00000533048 PTGS2P35354 604 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 PTGER4P35408 488 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 CDKN2AP42771 156 aaKnown RBP13.16□□□□□ -0.3
NXF1-214ENST00000533048 CHN2P52757 468 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 SLC25A1P53007 311 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 MLLT10P55197 1068 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 CSNK2BP67870 215 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 C1DQ13901 141 aaKnown RBP13.16□□□□□ -0.3
NXF1-214ENST00000533048 LY6DQ14210 128 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 RNPS1Q15287 305 aaKnown RBP13.16□□□□□ -0.3
NXF1-214ENST00000533048 CHMP1BQ7LBR1 199 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 OR4K13Q8NH42 304 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 ABHD3Q8WU67 409 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 ROBO4Q8WZ75 1007 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 TMEM45BQ96B21 275 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 TXNDC15Q96J42 360 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 Q96MT0 163 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 KCNK17Q96T54 332 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 MRPL13Q9BYD1 178 aaKnown RBP13.16□□□□□ -0.3
NXF1-214ENST00000533048 ASF1BQ9NVP2 202 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 CLN6Q9NWW5 311 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 MED29Q9NX70 200 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 VSX1Q9NZR4 365 aaPredicted RBP13.16□□□□□ -0.3
NXF1-214ENST00000533048 KLHL9Q9P2J3 617 aa13.16□□□□□ -0.3
NXF1-214ENST00000533048 PRRC2CQ9Y520 2896 aaKnown RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 PRSS37A4D1T9 235 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 CD8B2A6NJW9 211 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 SLC22A20A6NK97 555 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ZNF724A8MTY0 619 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 SLC1A7O00341 560 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 XKRYO14609 159 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 GPR171O14626 319 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 PRODHO43272 600 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ENTPD6O75354 484 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 SERPINI2O75830 405 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ZNF432O94892 652 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 PGA4P0DJD7 388 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 PGA3P0DJD8 388 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 GABRA1P14867 456 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 SLC2A5P22732 501 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ACVR2AP27037 513 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ACVR1BP36896 505 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 BIDP55957 195 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 RASGEF1BQ0VAM2 473 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 MELKQ14680 651 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.34e-7■■■□□ 15.8
NXF1-214ENST00000533048 HIST3H3Q16695 136 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ACSF3Q4G176 576 aaPredicted RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 PRR30Q53SZ7 412 aaPredicted RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 RBM48Q5RL73 367 aaKnown RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 NIPAL3Q6P499 406 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 PLBD1Q6P4A8 553 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 LEG1Q6P5S2 330 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 CXXC5Q7LFL8 322 aaKnown RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 JAZF1Q86VZ6 243 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 CPOQ8IVL8 374 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 GID4Q8IVV7 300 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 WDFY1Q8IWB7 410 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 TMEM123Q8N131 208 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 FAM57AQ8TBR7 257 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 PTP4A1Q93096 173 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 NMD3Q96D46 503 aaKnown RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 SLC25A44Q96H78 314 aaPredicted RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 ZNF582Q96NG8 517 aaPredicted RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
NXF1-214ENST00000533048 NMNAT3Q96T66 252 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ALG12Q9BV10 488 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 HCAR1Q9BXC0 346 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 CALHM2Q9HA72 323 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 EMC3Q9P0I2 261 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 AASSQ9UDR5 926 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 ZNF835Q9Y2P0 537 aa13.15□□□□□ -0.3
NXF1-214ENST00000533048 SLC22A23A1A5C7 686 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 FAM183AA6NL82 134 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 PRR23D1E9PI22 279 aaPredicted RBP13.14□□□□□ -0.31
NXF1-214ENST00000533048 AKAP8O43823 692 aaKnown RBP13.14□□□□□ -0.31
NXF1-214ENST00000533048 WDR1O75083 606 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 HOXD4P09016 255 aaPredicted RBP13.14□□□□□ -0.31
NXF1-214ENST00000533048 PRR23D2P0DMB1 279 aaPredicted RBP13.14□□□□□ -0.31
NXF1-214ENST00000533048 EDN3P14138 238 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 CRHBPP24387 322 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 SLC15A1P46059 708 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 RUNX1T1Q06455 604 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 TMED1Q13445 227 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 GUSBP1Q15486 140 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 SMN1Q16637 294 aaKnown RBP13.14□□□□□ -0.31
NXF1-214ENST00000533048 KCTD21Q4G0X4 260 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 EEF1A1P5Q5VTE0 462 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 NSUN5P2Q63ZY6 315 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 GTF2IRD2BQ6EKJ0 949 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 GTF2IRD2Q86UP8 949 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 ZNF786Q8N393 782 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 NOXO1Q8NFA2 376 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 FNDC8Q8TC99 324 aa13.14□□□□□ -0.31
NXF1-214ENST00000533048 WNT2BQ93097 391 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms