RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 STX4Q12846 297 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 PAGE3Q5JUK9 113 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 FAM27BQ5VT28 67 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 OLFML2AQ68BL7 652 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 SLC43A2Q8N370 569 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 RPP25LQ8N5L8 163 aaKnown RBP1.33□□□□□ -2.2
KNL1-211ENST00000533001 TEX9Q8N6V9 391 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 OR9I1Q8NGQ6 314 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 ZMYND19Q96E35 227 aaPredicted RBP1.33□□□□□ -2.2
KNL1-211ENST00000533001 LYZL4Q96KX0 146 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 RBM4Q9BWF3 364 aaKnown RBP1.33□□□□□ -2.2
KNL1-211ENST00000533001 BTBD2Q9BX70 525 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 BEX2Q9BXY8 128 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 ACBD3Q9H3P7 528 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 TPK1Q9H3S4 243 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 MACROD2A1Z1Q3 448 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 MAGEA13PA6NCF6 341 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 PSMD3O43242 534 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 AKR7A3O95154 331 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 FAM157BP0CG42 384 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 G6PDP11413 515 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 APEHP13798 732 aaKnown RBP1.33□□□□□ -2.2
KNL1-211ENST00000533001 GGT1P19440 569 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 TMED10P49755 219 aaKnown RBP1.33□□□□□ -2.2
KNL1-211ENST00000533001 CCNIQ14094 377 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 RCAN2Q14206 197 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 CEACAM16Q2WEN9 425 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 LIPMQ5VYY2 423 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 TMEM42Q69YG0 159 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 HBMQ6B0K9 141 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 C17orf107Q6ZR85 190 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 GRINAQ7Z429 371 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 ANGPTL6Q8NI99 470 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 MTERF3Q96E29 417 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 TMEM38BQ9NVV0 291 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 ASB6Q9NWX5 421 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 NUP50Q9UKX7 468 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 PPP2R2CQ9Y2T4 447 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 STARD10Q9Y365 291 aa1.33□□□□□ -2.2
KNL1-211ENST00000533001 TRAV20A0A0B4J274 112 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 A0A1B0GW64 132 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 I3L521 148 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 HCKP08631 526 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 CSF3P09919 207 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 EPB42P16452 691 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 GABRA3P34903 492 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 XGP55808 180 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 TTLL9Q3SXZ7 439 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 DCST2Q5T1A1 773 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MRPL2Q5T653 305 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 AGAP6Q5VW22 663 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 SLC2A7Q6PXP3 512 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ZBTB46Q86UZ6 589 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MRPL41Q8IXM3 137 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 LINC00528Q8N1L1 170 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 C17orf53Q8N3J3 647 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 DYRK2Q92630 601 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ARL8AQ96BM9 186 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 PHF21BQ96EK2 531 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MS4A4EQ96PG1 132 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 ZNF251Q9BRH9 671 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 OR2J1Q9GZK6 312 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MARCH7Q9H992 704 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 A4GNTQ9UNA3 340 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 SNX24Q9Y343 169 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 A0A096LPE4 126 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 A0A1W2PPZ6 126 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 SMNDC1O75940 238 aaKnown RBP eCLIP1.32□□□□□ -2.2
KNL1-211ENST00000533001 MPZL1O95297 269 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MT-ND5P03915 603 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 CTLA4P16410 223 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 BGNP21810 368 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 PPARGP37231 505 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 FAM209AQ5JX71 171 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 AAGABQ6PD74 315 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 C3orf62Q6ZUJ4 267 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 PXKQ7Z7A4 578 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 GAPTQ8N292 157 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 RNF148Q8N7C7 305 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 BEND2Q8NDZ0 799 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 NSMCE1Q8WV22 266 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 NEU4Q8WWR8 484 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 SERPINI1Q99574 410 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 BAG1Q99933 345 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 CITED2Q99967 270 aaPredicted RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 MRPL46Q9H2W6 279 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 C12orf10Q9HB07 376 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MSL2Q9HCI7 577 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 HOOK1Q9UJC3 728 aaKnown RBP1.32□□□□□ -2.2
KNL1-211ENST00000533001 FBXO7Q9Y3I1 522 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 POMT1Q9Y6A1 747 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 IGKV1-27A0A075B6S5 117 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 A0A087X0M5 115 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 A0A1B0GX30 115 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 A0A1W2PPI3 338 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 hCG_2039718K7EN88 272 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 REM1O75628 298 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MBD3O95983 291 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MASP1P48740 699 aa1.32□□□□□ -2.2
KNL1-211ENST00000533001 MAPK12P53778 367 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms