RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ARHGDIGQ99819 225 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 ST6GALNAC5Q9BVH7 336 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 SLC19A3Q9BZV2 496 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 SLAMF7Q9NQ25 335 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 GPATCH2Q9NW75 528 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 UBE2J1Q9Y385 318 aaPredicted RBP14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 EMC9Q9Y3B6 208 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 A6NLC8 198 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 VSTM5A8MXK1 200 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 POU3F2P20265 443 aaPredicted RBP14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 ADH6P28332 368 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 SELENOVP59797 346 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 IL13RA1P78552 427 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 ASAH1Q13510 395 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 VWA2Q5GFL6 755 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 UNQ6126/PRO20091Q6UXV3 157 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 PLA2G12AQ9BZM1 189 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 FAM86C1Q9NVL1 165 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 PCDHGA3Q9Y5H0 932 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 PRAMEF4O60810 478 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 APOC3P02656 99 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 ICAM2P13598 275 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 GFERP55789 205 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 UBE2NP61088 152 aaKnown RBP14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 AGERQ15109 404 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 PRAMEF9Q5VWM5 478 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 SYS1Q8N2H4 156 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 OR2A14Q96R47 310 aa14.05□□□□□ -0.16
PCDHA3-202ENST00000532566 CABIN1Q9Y6J0 2220 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 IGHV3-20A0A0C4DH32 117 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 SULT1C4O75897 302 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 BDKRB2P30411 391 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 SLC26A5P58743 744 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 RPL27P61353 136 aaKnown RBP14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 SLC35A1P78382 337 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 LINC00346Q8IVM7 164 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 OR51D1Q8NGF3 324 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 METTL17Q9H7H0 456 aaPredicted RBP14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 UBE2ZQ9H832 354 aaPredicted RBP14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 NIPAL2Q9H841 368 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 IL20Q9NYY1 176 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 PISDQ9UG56 409 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 MCTS1Q9ULC4 181 aaKnown RBP14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 CHST2Q9Y4C5 530 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 LOC102725191A0A1B0GVB3 256 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 TRABD2BA6NFA1 517 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 SDHAP31040 664 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 CDK10Q15131 360 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 FAM57BQ71RH2 274 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 MRPL21Q7Z2W9 205 aaKnown RBP14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 SLC7A6Q92536 515 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 TSLPQ969D9 159 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 ZBTB8AQ96BR9 441 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 M0R036 132 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 M0R082 166 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 LIPCP11150 499 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 MSX1P28360 303 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 EIF1P41567 113 aaKnown RBP14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 CLDN17P56750 224 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 ESPNLQ6ZVH7 1005 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 NANOS1Q8WY41 292 aaKnown RBP14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 DOK1Q99704 481 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 GAREM1Q9H706 876 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 MUTYHQ9UIF7 546 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 SCN10AQ9Y5Y9 1956 aa14.04□□□□□ -0.16
PCDHA3-202ENST00000532566 PRAMEF25A6NGN4 478 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SPDEFO95238 335 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 ELK1P19419 428 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 DPP4P27487 766 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 RIN1Q13671 783 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 H1FNTQ75WM6 255 aaPredicted RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 OVCH1Q7RTY7 1134 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 OR2L13Q8N349 312 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 IL17RDQ8NFM7 739 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 OR1J4Q8NGS1 313 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 TSNAXQ99598 290 aaKnown RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SLIRPQ9GZT3 109 aaKnown RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 GALNT9Q9HCQ5 603 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 FAM230AA0A1W2PPH8 454 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 YKT6O15498 198 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SULT1B1O43704 296 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SSR4P51571 173 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 COMMD7Q86VX2 200 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SGPP2Q8IWX5 399 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 KDM8Q8N371 416 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 AIFM2Q9BRQ8 373 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 C2orf72A6NCS6 295 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 IDSB3KWA1 339 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 TNFRSF10AO00220 468 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 CTSVO60911 334 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 POU2F2P09086 479 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SOX18P35713 384 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SMAD4Q13485 552 aaKnown RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 CNN3Q15417 329 aaKnown RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 KIRREL2Q6UWL6 708 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 GPR155Q7Z3F1 870 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 STT3BQ8TCJ2 826 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 RSPRY1Q96DX4 576 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 VRK1Q99986 396 aaPredicted RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 NXF5Q9H1B4 397 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms