RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 ZNF35P13682 527 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 HLA-DOBP13765 273 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 B4GALT1P15291 398 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 ZNF14P17017 642 aaPredicted RBP7.64□□□□□ -1.19
USF1-210ENST00000531842 ACAA2P42765 397 aaKnown RBP7.64□□□□□ -1.19
USF1-210ENST00000531842 CDKN2CP42773 168 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 CRATP43155 626 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 MVDP53602 400 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 FOXL1Q12952 345 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 RAB39AQ14964 217 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 C3orf36Q3SXR2 165 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 LIN52Q52LA3 116 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 RPS26P11Q5JNZ5 115 aaPredicted RBP7.64□□□□□ -1.19
USF1-210ENST00000531842 TMEM255AQ5JRV8 349 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
USF1-210ENST00000531842 AP1ARQ63HQ0 302 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 NXNQ6DKJ4 435 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 ACSM5Q6NUN0 579 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 LEG1Q6P5S2 330 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 UGT2A3Q6UWM9 527 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 ZNF836Q6ZNA1 936 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 ZNF440Q8IYI8 595 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 CLIP4Q8N3C7 705 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 KTI12Q96EK9 354 aaPredicted RBP7.64□□□□□ -1.19
USF1-210ENST00000531842 EBF4Q9BQW3 602 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 PTDSS2Q9BVG9 487 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 LINC00470Q9BZP3 86 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 C7orf69Q9H7B7 122 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 SLC52A3Q9NQ40 469 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 DCAF16Q9NXF7 216 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 PDP1Q9P0J1 537 aaPredicted RBP7.64□□□□□ -1.19
USF1-210ENST00000531842 TAAR3PQ9P1P4 343 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 CHST2Q9Y4C5 530 aa7.64□□□□□ -1.19
USF1-210ENST00000531842 DOCK11Q5JSL3 2073 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 A0A0G2JMP0 313 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 A0A0X1KG70 313 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 TMEM247A6NEH6 219 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 A8MVM7 634 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 VSTM5A8MXK1 200 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 FTCDNL1E5RQL4 147 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 FAAHO00519 579 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 HOXB9P17482 250 aaPredicted RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 GTF2E2P29084 291 aaKnown RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 ARR3P36575 388 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 GIPRP48546 466 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 PTDSS1P48651 473 aaKnown RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 TMEM33P57088 247 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 EGR4Q05215 589 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 LRRC74AQ0VAA2 488 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 LARS2Q15031 903 aaKnown RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 FXNQ16595 210 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 TSTQ16762 297 aaKnown RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 GLIPR1L2Q4G1C9 344 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 C1QTNF12Q5T7M4 302 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 GKAP1Q5VSY0 366 aaPredicted RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 WBP2NLQ6ICG8 309 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 EPGNQ6UW88 154 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 ZNF584Q8IVC4 421 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 FUNDC1Q8IVP5 155 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 TMEM123Q8N131 208 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 GPR137CQ8N3F9 429 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 LRRC17Q8N6Y2 441 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 FAM169BQ8N8A8 192 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 OR4M2Q8NGB6 313 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 OR9I1Q8NGQ6 314 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 OR52P1PQ8NH57 321 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 NANPQ8TBE9 248 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 TXNDC15Q96J42 360 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 OR2M2Q96R28 347 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 PKP2Q99959 881 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 RSPO3Q9BXY4 272 aaPredicted RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 ARMC7Q9H6L4 198 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 MMP26Q9NRE1 261 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 NKIRAS1Q9NYS0 192 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 CALML5Q9NZT1 146 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 P2RX2Q9UBL9 471 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 ZNF232Q9UNY5 417 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 WIPI2Q9Y4P8 454 aa7.63□□□□□ -1.19
USF1-210ENST00000531842 KMT2CQ8NEZ4 4911 aaKnown RBP7.63□□□□□ -1.19
USF1-210ENST00000531842 CDHR4A6H8M9 788 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 TRPC5OSA6NMA1 111 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 LRRN3E7EW58 273 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 RPL36A-HNRNPH2H7BZ11 118 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 M0R082 166 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 TRAF3IP2O43734 574 aaPredicted RBP7.62□□□□□ -1.19
USF1-210ENST00000531842 NPIPB7O75200 414 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 SLC43A1O75387 559 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 SLC22A3O75751 556 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 VAMP5O95183 116 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 AHSA1O95433 338 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 GPANK1O95872 356 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 IL6P05231 212 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 TFPTP0C1Z6 253 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 ETFAP13804 333 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 ZNF43P17038 809 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 MAKP20794 623 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 RPS4Y1P22090 263 aaKnown RBP7.62□□□□□ -1.19
USF1-210ENST00000531842 PAX7P23759 505 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 PRTN3P24158 256 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 PCGF2P35227 344 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms