RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CDK5R1Q15078 307 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 DECR1Q16698 335 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 AKIRIN2Q53H80 203 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 NRROSQ86YC3 692 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF614Q8N883 585 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 OR4K17Q8NGC6 315 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 CXorf40AQ8TE69 158 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 DTD1Q8TEA8 209 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 MVB12AQ96EY5 273 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 CPNE2Q96FN4 548 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-214ENST00000530886 PPP1R16AQ96I34 528 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 STACQ99469 402 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 MICU1Q9BPX6 476 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 CHST6Q9GZX3 395 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 EPHX3Q9H6B9 360 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 CXorf36Q9H7Y0 433 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF219Q9P2Y4 722 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF107Q9UII5 783 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-214ENST00000530886 YBX2Q9Y2T7 364 aaKnown RBP7.44□□□□□ -1.22
CSDE1-214ENST00000530886 ADAM18Q9Y3Q7 739 aa7.44□□□□□ -1.22
CSDE1-214ENST00000530886 GNG14A0A1W2PPG7 69 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF587BE7ETH6 402 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 H3BRB1 525 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 FOXE1O00358 373 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 DVL1O14640 695 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 GPRIN2O60269 458 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 B4GALT2O60909 372 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 B4GALNT1Q00973 533 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TAF13Q15543 124 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 KHDC3LQ587J8 217 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TPGS2Q68CL5 300 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 UNQ6126/PRO20091Q6UXV3 157 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 FRRS1Q6ZNA5 592 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 FAM24BQ8N5W8 94 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 NUBPLQ8TB37 319 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 C16orf78Q8WTQ4 265 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ASB17Q8WXJ9 295 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ACTR3CQ9C0K3 210 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 RIMS4Q9H426 269 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 FN3KRPQ9HA64 309 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PRDM7Q9NQW5 492 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PRODH2Q9UF12 536 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 SCML2Q9UQR0 700 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PRAMEF27A3QJZ7 478 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TVP23AA6NH52 213 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 UNC119BA6NIH7 251 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 M0R3H8 397 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ADAP1O75689 374 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 CSRP1P21291 193 aaKnown RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ADH6P28332 368 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 CD34P28906 385 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 HOXC8P31273 242 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 CD200P41217 278 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PPICP45877 212 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 SULT1A2P50226 295 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TBX4P57082 545 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 MEF2AQ02078 507 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PRKCZQ05513 592 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TMEM31Q5JXX7 168 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PRPF38BQ5VTL8 546 aaKnown RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF610Q8N9Z0 462 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PCSK9Q8NBP7 692 aaKnown RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 OR10AD1Q8NGE0 317 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 OR8D1Q8WZ84 308 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 CRLF2Q9HC73 371 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 MYO10Q9HD67 2058 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TMEM269A0A1B0GVZ9 245 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TMEM210A6NLX4 147 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF726A6NNF4 738 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ZNF197O14709 1029 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 KDELR3O43731 214 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PMP2P02689 132 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 SLC2A5P22732 501 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ACVR1BP36896 505 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 HTRA4P83105 476 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 USF2Q15853 346 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 BEX5Q5H9J7 111 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TNFAIP8L2Q6P589 184 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 RPL22L1Q6P5R6 122 aaKnown RBP7.43□□□□□ -1.22
CSDE1-214ENST00000530886 C5orf24Q7Z6I8 188 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TRAM1L1Q8N609 369 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ACOT4Q8N9L9 421 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 CLEC1AQ8NC01 280 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 OR13C5Q8NGS8 318 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TMED6Q8WW62 240 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 OR5P2Q8WZ92 322 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 TMEM169Q96HH4 297 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 AKR1E2Q96JD6 320 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 IP6K3Q96PC2 410 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 SCRT1Q9BWW7 348 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 ADGRL4Q9HBW9 690 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 SPHK2Q9NRA0 654 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 RBPJLQ9UBG7 517 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 GAB2Q9UQC2 676 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 PRKAB1Q9Y478 270 aa7.43□□□□□ -1.22
CSDE1-214ENST00000530886 COL4A6Q14031 1691 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms