RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 NARFLQ9H6Q4 476 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 MRPS30Q9NP92 439 aaKnown RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 CHRAC1Q9NRG0 131 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 AGPAT3Q9NRZ7 376 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 MRPL22Q9NWU5 206 aaKnown RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 TREM2Q9NZC2 230 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 TBC1D24Q9ULP9 559 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 PACSIN2Q9UNF0 486 aaPredicted RBP3.23□□□□□ -1.89
C11orf88-204ENST00000529661 ABCG2Q9UNQ0 655 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 N6AMT1Q9Y5N5 214 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 KIF25-AS1Q9Y6Z4 181 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 INSRP06213 1382 aa3.23□□□□□ -1.89
C11orf88-204ENST00000529661 MMP1P03956 469 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 P04436 131 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 CCNB1P14635 433 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 SRMP19623 302 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 TBPP20226 339 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 CXCR2P25025 360 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 RPS5P46782 204 aaKnown RBP3.22□□□□□ -1.89
C11orf88-204ENST00000529661 RGRP47804 291 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 GSSP48637 474 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 CSNK1EP49674 416 aaKnown RBP3.22□□□□□ -1.89
C11orf88-204ENST00000529661 KLK7P49862 253 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 CDH6P55285 790 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 PLP1P60201 277 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 LYZP61626 148 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 TGFBR3Q03167 851 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 TLE4Q04727 773 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 ALKBH6Q3KRA9 238 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 MARCH8Q5T0T0 291 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 TIGD3Q6B0B8 471 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF544Q6NX49 715 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 TMEM53Q6P2H8 277 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 TMEM220Q6QAJ8 160 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 LRRC31Q6UY01 552 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 SCARA5Q6ZMJ2 495 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 KRTAP11-1Q8IUC1 163 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 SDR9C7Q8NEX9 313 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 OR7G2Q8NG99 324 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 SUN5Q8TC36 379 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 GPX8Q8TED1 209 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 CIDECQ96AQ7 238 aaPredicted RBP3.22□□□□□ -1.89
C11orf88-204ENST00000529661 ZIM3Q96PE6 472 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 TECTBQ96PL2 329 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 PANX2Q96RD6 677 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 PLEKHF1Q96S99 279 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 SLC7A5P2Q9GIP4 190 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 IKZF2Q9UKS7 526 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 ZNF256Q9Y2P7 627 aaPredicted RBP3.22□□□□□ -1.89
C11orf88-204ENST00000529661 KCNIP3Q9Y2W7 256 aa3.22□□□□□ -1.89
C11orf88-204ENST00000529661 CSDC2Q9Y534 153 aaKnown RBP3.22□□□□□ -1.89
C11orf88-204ENST00000529661 FANCIQ9NVI1 1328 aa3.21□□□□□ -1.89
C11orf88-204ENST00000529661 NSG1A0A0A6YYJ2 146 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 SMCO3A2RU48 225 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 K7ERQ8 282 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF780AO75290 641 aaPredicted RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 OR7A10O76100 309 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 OR2F2O95006 317 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 H6PDO95479 791 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 LY6G6DO95868 133 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 ATP6V1B2P21281 511 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 GLP1RP43220 463 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 ARRB1P49407 418 aaPredicted RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 DLX1P56177 255 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 DAOAP59103 153 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 FAM83EQ2M2I3 478 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 HNRNPA1L2Q32P51 320 aaKnown RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 CCDC122Q5T0U0 273 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 CASC10Q5T4H9 136 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 TMIGD1Q6UXZ0 262 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 SLC25A48Q6ZT89 311 aaKnown RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 VTCN1Q7Z7D3 282 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 LINC00523Q86TU6 105 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 SLC26A11Q86WA9 606 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 PIANPQ8IYJ0 282 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 OR51S1Q8NGJ8 323 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF707Q96C28 371 aaPredicted RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 MSANTD3Q96H12 275 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 PLEKHA8Q96JA3 519 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 MAGEB18Q96M61 343 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 MBOAT4Q96T53 435 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 P2RY13Q9BPV8 354 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 YTHDF1Q9BYJ9 559 aaKnown RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 MFFQ9GZY8 342 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 ILKAPQ9H0C8 392 aaPredicted RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 ANKRA2Q9H9E1 313 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 LY9Q9HBG7 655 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 AIG1Q9NVV5 245 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 GIN1Q9NXP7 522 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 VANGL2Q9ULK5 521 aa3.21□□□□□ -1.9
C11orf88-204ENST00000529661 RAI1Q7Z5J4 1906 aaPredicted RBP3.21□□□□□ -1.9
C11orf88-204ENST00000529661 CENPJQ9HC77 1338 aaPredicted RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 A0A0J9YXY3 114 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 OR6C74A6NCV1 312 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 POLR1CO15160 346 aaPredicted RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 TOM1O60784 492 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 C1orf105O95561 183 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 YEATS4O95619 227 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 TMEM50AO95807 157 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 IGHV2-5P01817 119 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms